Gene: AT2G39940 (Arabidopsis thaliana)

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Gene Identifier
AT2G39940
Transcript Identifier
AT2G39940.1
Gene Type
Coding gene
Location
2 : 16672848-16675486 : negative

Family

Gene family
HOM03M000440
(144 genes in 14 species)
specific family

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Descriptions

Description
RNI-like superfamily protein
Curated Summary
Encodes a protein containing Leu-rich repeats and a degenerate F-box motif. Associates with AtCUL1, AtRbx1, and the Skp1-like proteins ASK1 and ASK2 to assemble SCF COI1 ubiquitin-ligase complexes in planta. A single amino acid substitution in the F-box motif of COI1 abolishes the formation of the SCF(COI1) complexes and results in loss of the JA response. Required for wound- and jasmonates-induced transcriptional regulation.
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Identifiers

Identifier Name
aliasCOI1
aliasCORONATINE INSENSITIVE 1
uniprotO04197

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006511RCA, TASGene Ontologyubiquitin-dependent protein catabolic process1 2
GO:0009861TASUniProtjasmonic acid and ethylene-dependent systemic resistance1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16
GO:0009867IGI, TAS, UniProtjasmonic acid mediated signaling pathway1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17
GO:0009625IMPUniProtresponse to insect1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16
GO:0009611IMPGene Ontologyresponse to wounding1
GO:0009753IMPGene Ontologyresponse to jasmonic acid1
GO:0031348IMPUniProtnegative regulation of defense response1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16
GO:0010118IMPUniProtstomatal movement1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16
GO:0042742IMPUniProtdefense response to bacterium1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16
GO:0050832IMPUniProtdefense response to fungus1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16
GO:0031146IMPUniProtSCF-dependent proteasomal ubiquitin-dependent protein catabolic process1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16
GO:0009641IMPUniProtshade avoidance1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16
GO:0009909IMPUniProtregulation of flower development1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16
GO:0010218IMPUniProtresponse to far red light1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16
GO:0002237RCAGene Ontologyresponse to molecule of bacterial origin1
GO:0007165RCAGene Ontologysignal transduction1
GO:0010103RCAGene Ontologystomatal complex morphogenesis1
GO:0042752RCAGene Ontologyregulation of circadian rhythm1
GO:0048443RCAGene Ontologystamen development1
GO:0006952TASGene Ontologydefense response1
GO:0016567IEAUniProtprotein ubiquitination1 2 3 4 5 6 7 8 9 10 11 12 13 14 15

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IPIGene Ontologyprotein binding1
GO:0004842ISSGene Ontologyubiquitin-protein ligase activity1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISMGene Ontologynucleus1
GO:0019005IPIUniProtSCF ubiquitin ligase complex1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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No InterPro domains detected for this gene.
Mapman id Description
29.5.11.4.3.2protein.degradation.ubiquitin.E3.SCF.FBOX
No SignalP domains detected for this gene.