Gene: AT2G34900 (Arabidopsis thaliana)

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Gene Identifier
AT2G34900
Transcript Identifier
AT2G34900.1
Gene Type
Coding gene
Location
2 : 14723333-14725562 : negative

Family

Gene family
HOM03M000339
(172 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Transcription factor GTE6
Curated Summary
Encodes a member of the BET subgroup of bromodomain proteins, a novel class of putative transcription factors. Its expression is induced during seed imbibition and downregulated during germination. Seeds of a loss-of-function mutant allele, imb1, show impaired cotyledon greening during germination in abscisic acid (ABA) and express higher levels of ABI5 protein than the wild type. Moreover, imb1 seeds are deficient in the phytochrome A (phyA)-mediated very-low-fluence response of germination.
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Identifiers

Identifier Name
aliasGTE1
aliasIMB1
aliasGTE01
aliasGLOBAL TRANSCRIPTION FACTOR GROUP E1
aliasIMBIBITION-INDUCIBLE 1
uniprotQ84XV2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010030IMPUniProtpositive regulation of seed germination1 2 3 4
GO:0045893IMPUniProtpositive regulation of transcription, DNA-dependent1 2 3 4
GO:0000398RCAGene OntologymRNA splicing, via spliceosome1
GO:0009560RCAGene Ontologyembryo sac egg cell differentiation1
GO:0006351IEAUniProttranscription, DNA-templated1 2 3

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677ISSGene OntologyDNA binding1
GO:0005515IEAInterProprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISM, UniProtnucleus1 2 3 4 5

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001487Bromodomain
IPR027353NET domain
IPR018359Bromodomain, conserved site

Mapman id Description
27.3.52RNA.regulation of transcription.Global transcription factor group
No SignalP domains detected for this gene.