Gene: AT2G32950 (Arabidopsis thaliana)

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Gene Identifier
AT2G32950
Transcript Identifier
AT2G32950.1
Gene Type
Coding gene
Location
2 : 13978000-13983282 : positive

Family

Gene family
HOM03M000659
(104 genes in 16 species)
specific family

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Descriptions

Description
Transducin/WD40 repeat-like superfamily protein
Curated Summary
Represses photomorphogenesis and induces skotomorphogenesis in the dark. Contains a ring finger zinc-binding motif, a coiled-coil domain, and several WD-40 repeats, similar to G-beta proteins. The C-terminus has homology to TAFII80, a subunit of the TFIID component of the RNA polymerase II of Drosophila. Nuclear localization in the dark and cytoplasmic in the light.
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Identifiers

Identifier Name
aliasEMB168
aliasEMBRYO DEFECTIVE 168
aliasCONSTITUTIVE PHOTOMORPHOGENIC 1
aliasFUSCA 1
aliasDET340
aliasARABIDOPSIS THALIANA CONSTITUTIVE PHOTOMORPHOGENIC 1
aliasFUS1
aliasATCOP1
aliasCOP1
aliasDEETIOLATED MUTANT 340
uniprotP43254

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009640IGI, TAS, UniProtphotomorphogenesis1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24
GO:0009647TASUniProtskotomorphogenesis1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23
GO:0010119IMP, IGIUniProtregulation of stomatal movement1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24
GO:0046283IMPUniProtanthocyanin-containing compound metabolic process1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23
GO:0048573IMPUniProtphotoperiodism, flowering1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23
GO:0006281IMP, RCA, UniProtDNA repair1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24
GO:0009649IMPUniProtentrainment of circadian clock1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23
GO:0010100RCAGene Ontologynegative regulation of photomorphogenesis1
GO:0048608RCAGene Ontologyreproductive structure development1
GO:0009641IMPUniProtshade avoidance1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23
GO:0009585IEAUniProtred, far-red light phototransduction1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IPI, IEAGene Ontologyprotein binding1
GO:0004842IDAUniProtubiquitin-protein ligase activity1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23
GO:0008270IEAUniProtzinc ion binding1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22
GO:0043167IEAPLAZA Homologyion bindingHOM03M000659

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, IMP, ISMGene Ontologynucleus1 2 3
GO:0000152TASUniProtnuclear ubiquitin ligase complex1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23
GO:0080008ISSUniProtCul4-RING ubiquitin ligase complex1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23
GO:0016604IDAUniProtnuclear body1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23
GO:0005737IEAUniProtcytoplasm1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015943WD40/YVTN repeat-like-containing domain
IPR001680WD40 repeat
IPR001841Zinc finger, RING-type
IPR019775WD40 repeat, conserved site
IPR017986WD40-repeat-containing domain
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR017907Zinc finger, RING-type, conserved site

Mapman id Description
33.99development.unspecified
No SignalP domains detected for this gene.