Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchGene: AT2G32780 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT2G32780
- Transcript Identifier
- AT2G32780.1
- Gene Type
- Coding gene
- Location
- 2 : 13898431-13901870 : negative
Family
- Gene family
- Duplication type
- Block duplicate
Identifiers
| Identifier | Name |
|---|---|
| alias | ATUBP1 |
| alias | ubiquitin-specific protease 1 |
| alias | UBP1 |
| uniprot | Q9FPT5 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0006511 | IEA | UniProt | ubiquitin-dependent protein catabolic process | 1 2 |
Molecular Function
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0004843 | ISS | Gene Ontology | ubiquitin-specific protease activity | 1 |
| GO:0008234 | IEA | UniProt | cysteine-type peptidase activity | 1 2 |
| GO:0004221 | IEA | UniProt | ubiquitin thiolesterase activity | 1 2 |
| GO:0008270 | IEA | UniProt | zinc ion binding | 1 2 |
Cellular Component
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0005634 | ISM | Gene Ontology | nucleus | 1 |
Color Legend
| Experimental Evidence |
| Electronic Evidence |
| Computational Reviewed Evidence |
| Mapman id | Description |
|---|---|
| 29.5.11.5 | protein.degradation.ubiquitin.ubiquitin protease |
No SignalP domains detected for this gene.