Gene: AT2G29890 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT2G29890
Transcript Identifier
AT2G29890.3
Gene Type
Coding gene
Location
2 : 12744597-12749474 : positive

Family

Gene family
HOM03M000757
(93 genes in 15 species)
specific family
Subfamily
ORTHO03M003857
(7 genes in 6 species)
specific family

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Descriptions

Description
villin-like 1
Curated Summary
Encodes a ubiquitously expressed villin-like protein, whose mRNA may be alternatively processed. Villin belongs to a superfamily of actin binding proteins called the villin/gelsolin family. Animal villins are involved in actin binding. VLN1 protein co-localizes with actin filaments in several assays. VLN1 binds and bundles F-actin in a calcium-independent manner. It does not nucleate, cap or sever actin filaments and it stabilizes actin filaments, protecting them from ADF-mediated depolymerization.
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Identifiers

Identifier Name
aliasvillin 1
aliasATVLN1
aliasVLN1
uniprotO81643

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007010IEA, ISSUniProtcytoskeleton organization1 2 3
GO:0007015IPIGene Ontologyactin filament organization1
GO:0030042IDAGene Ontologyactin filament depolymerization1
GO:0030835IDAGene Ontologynegative regulation of actin filament depolymerization1
GO:0045010IDA, RCAGene Ontologyactin nucleation1 2
GO:0051014IDAGene Ontologyactin filament severing1
GO:0051016IDAGene Ontologybarbed-end actin filament capping1
GO:0000226RCAGene Ontologymicrotubule cytoskeleton organization1
GO:0000278RCAGene Ontologymitotic cell cycle1
GO:0000911RCAGene Ontologycytokinesis by cell plate formation1
GO:0006306RCAGene OntologyDNA methylation1
GO:0006342RCAGene Ontologychromatin silencing1
GO:0006346RCAGene Ontologymethylation-dependent chromatin silencing1
GO:0009965RCAGene Ontologyleaf morphogenesis1
GO:0016246RCAGene OntologyRNA interference1
GO:0016569RCAGene Ontologycovalent chromatin modification1
GO:0016572RCAGene Ontologyhistone phosphorylation1
GO:0031047RCAGene Ontologygene silencing by RNA1
GO:0031048RCAGene Ontologychromatin silencing by small RNA1
GO:0042127RCAGene Ontologyregulation of cell proliferation1
GO:0048523RCAGene Ontologynegative regulation of cellular process1
GO:0051225RCAGene Ontologyspindle assembly1
GO:0051258RCAGene Ontologyprotein polymerization1
GO:0051567RCAGene Ontologyhistone H3-K9 methylation1
GO:0051693IEAUniProtactin filament capping1 2

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003779IDA, ISS, IEAGene Ontologyactin binding1 2
GO:0051015IPIGene Ontologyactin filament binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEA, ISMUniProtcytoplasm1 2 3
GO:0015629IDAGene Ontologyactin cytoskeleton1
GO:0005856IEAUniProtcytoskeleton1 2

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR007122Villin/Gelsolin
IPR007123Gelsolin domain
IPR003128Villin headpiece

Mapman id Description
31.1cell.organisation
No SignalP domains detected for this gene.