Gene: AT2G28160 (Arabidopsis thaliana)

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Gene Identifier
AT2G28160
Transcript Identifier
AT2G28160.1
Gene Type
Coding gene
Location
2 : 12004713-12005908 : positive

Family

Gene family
HOM03M000348
(169 genes in 14 species)
specific family
Subfamily
ORTHO03M015927
(3 genes in 3 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
FER-like regulator of iron uptake
Curated Summary
Encodes a putative transcription factor that regulates iron uptake responses. mRNA is detected in the outer cell layers of the root and accumulates in response to iron deficiency. The expression of many iron-regulated genes is dependent on FIT1. It specifically regulates FRO2 at the level of mRNA accumulation and IRT1 at the level of protein accumulation.Similar to FER in tomato and is a regulator of iron uptake. It is post-transcriptionally controlled.
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Identifiers

Identifier Name
aliasFIT1
aliasATFIT1
aliasBASIC HELIX-LOOP-HELIX PROTEIN 29
aliasATBHLH029
aliasBHLH029
aliasFER-like regulator of iron uptake
aliasATBHLH29
aliasFE-DEFICIENCY INDUCED TRANSCRIPTION FACTOR 1
aliasFRU
aliasARABIDOPSIS FE-DEFICIENCY INDUCED TRANSCRIPTION FACTOR 1
uniprotQ0V7X4

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355TASGene Ontologyregulation of transcription, DNA-dependent1
GO:0010039IMPGene Ontologyresponse to iron ion1
GO:0034756IMPUniProtregulation of iron ion transport1 2 3 4 5 6 7 8 9 10
GO:0071281IEPUniProtcellular response to iron ion1 2 3 4 5 6 7 8 9 10
GO:0071369IEPUniProtcellular response to ethylene stimulus1 2 3 4 5 6 7 8 9 10
GO:0071732IEPUniProtcellular response to nitric oxide1 2 3 4 5 6 7 8 9 10
GO:0000041RCAGene Ontologytransition metal ion transport1
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4 5 6 7 8 9

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEA, ISSUniProtDNA binding1 2 3 4 5 6 7 8 9 10
GO:0003700ISSUniProtsequence-specific DNA binding transcription factor activity1 2 3 4 5 6 7 8 9 10
GO:0005515IPIGene Ontologyprotein binding1
GO:0046983IEAInterProprotein dimerization activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, ISMUniProtnucleus1 2 3 4 5 6 7 8 9 10

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain

Mapman id Description
27.3.6RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBbHLH
PlantTFDBbHLH