Gene: AT2G27040 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT2G27040
Transcript Identifier
AT2G27040.1
Gene Type
Coding gene
Location
2 : 11536795-11541503 : negative

Family

Gene family
HOM03M000188
(260 genes in 15 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description
Argonaute family protein
Curated Summary
AGO4 is a member of a class of PAZ/PIWI domain containing proteins involved in siRNA mediated gene silencing.Loss of function mutations have reduced site specific CpNpG and CpHpH methylation and increased susceptibility to bacterial pathogens.
Show more...

Identifiers

Identifier Name
aliasAGO4
aliasOCP11
aliasOVEREXPRESSOR OF CATIONIC PEROXIDASE 11
aliasARGONAUTE 4
uniprotQ9ZVD5

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006342IMP, RCAGene Ontologychromatin silencing1 2
GO:0051567IMP, RCA, UniProthistone H3-K9 methylation1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20
GO:0006306IMP, RCA, UniProtDNA methylation1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20
GO:0010495IMPGene Ontologylong-distance posttranscriptional gene silencing1
GO:0009816IMPUniProtdefense response to bacterium, incompatible interaction1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19
GO:0031048TAS, RCAUniProtchromatin silencing by small RNA1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20
GO:0030422IGIUniProtproduction of siRNA involved in RNA interference1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19
GO:0000023RCAGene Ontologymaltose metabolic process1
GO:0000226RCAGene Ontologymicrotubule cytoskeleton organization1
GO:0000278RCAGene Ontologymitotic cell cycle1
GO:0000724RCAGene Ontologydouble-strand break repair via homologous recombination1
GO:0000911RCAGene Ontologycytokinesis by cell plate formation1
GO:0006260RCAGene OntologyDNA replication1
GO:0006261RCAGene OntologyDNA-dependent DNA replication1
GO:0006275RCAGene Ontologyregulation of DNA replication1
GO:0006346RCAGene Ontologymethylation-dependent chromatin silencing1
GO:0007267RCAGene Ontologycell-cell signaling1
GO:0008283RCAGene Ontologycell proliferation1
GO:0009555RCAGene Ontologypollen development1
GO:0009616RCAGene Ontologyvirus induced gene silencing1
GO:0009855RCAGene Ontologydetermination of bilateral symmetry1
GO:0009909RCAGene Ontologyregulation of flower development1
GO:0009965RCAGene Ontologyleaf morphogenesis1
GO:0010014RCAGene Ontologymeristem initiation1
GO:0010073RCAGene Ontologymeristem maintenance1
GO:0010267RCAGene Ontologyproduction of ta-siRNAs involved in RNA interference1
GO:0016246RCAGene OntologyRNA interference1
GO:0016444RCAGene Ontologysomatic cell DNA recombination1
GO:0016458RCAGene Ontologygene silencing1
GO:0016568RCAGene Ontologychromatin modification1
GO:0016569RCAGene Ontologycovalent chromatin modification1
GO:0016570RCAGene Ontologyhistone modification1
GO:0016572RCAGene Ontologyhistone phosphorylation1
GO:0019252RCAGene Ontologystarch biosynthetic process1
GO:0031047RCAGene Ontologygene silencing by RNA1
GO:0034968RCAGene Ontologyhistone lysine methylation1
GO:0035196RCAGene Ontologyproduction of miRNAs involved in gene silencing by miRNA1
GO:0043085RCAGene Ontologypositive regulation of catalytic activity1
GO:0048449RCAGene Ontologyfloral organ formation1
GO:0051225RCAGene Ontologyspindle assembly1
GO:0051726RCAGene Ontologyregulation of cell cycle1
GO:0019048IEAUniProtmodulation by virus of host morphology or physiology1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18
GO:0006417IEAUniProtregulation of translation1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IPI, IEAGene Ontologyprotein binding1
GO:0035197IDAUniProtsiRNA binding1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19
GO:0003676IEAInterPronucleic acid binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISMGene Ontologynucleus1
GO:0005730IDAUniProtnucleolus1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19
GO:0005719IDAUniProtnuclear euchromatin1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19
GO:0015030IDAUniProtCajal body1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19
GO:0005829RCAGene Ontologycytosol1
GO:0030529IEAUniProtribonucleoprotein complex1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR003165Stem cell self-renewal protein Piwi
IPR003100Argonaute/Dicer protein, PAZ domain
IPR012337Ribonuclease H-like domain
IPR014811Domain of unknown function DUF1785

Mapman id Description
27.3.36RNA.regulation of transcription.Argonaute
No SignalP domains detected for this gene.