Gene: AT2G24740 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT2G24740
Transcript Identifier
AT2G24740.1
Gene Type
Coding gene
Location
2 : 10529690-10531957 : negative

Family

Gene family
HOM03M000227
(223 genes in 15 species)
specific family

Loading...please wait

Descriptions

Description
SET domain group 21
Curated Summary
Encodes a SU(VAR)3-9 homolog, a SET domain protein (Homology Subgroup V; Orthology Group 1). Known SET domain proteins are involved in epigenetic control of gene expression. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. This protein is a putative histone methyltransferase (predicted to methylate H3K9/20) related to the the Drosophila Su(var)3-9 and mammalian G9a proteins.
Show more...

Identifiers

Identifier Name
aliasSU(VAR)3-9 HOMOLOG 8
aliasSDG21
aliasSET domain group 21
aliasSUVH8
uniprotQ9C5P0

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0040029TASUniProtregulation of gene expression, epigenetic1 2 3 4
GO:0008361IMPUniProtregulation of cell size1 2 3 4
GO:0048366IMPUniProtleaf development1 2 3 4
GO:0016571IEAInterProhistone methylation
GO:0034968IEAInterProhistone lysine methylation
GO:0006325IEAPLAZA Homologychromatin organizationHOM03M000227
GO:0032259IEAPLAZA HomologymethylationHOM03M000227
GO:0051276IEAPLAZA Homologychromosome organizationHOM03M000227
GO:0006479IEAPLAZA Homologyprotein methylationHOM03M000227
GO:0016570IEAPLAZA Homologyhistone modificationHOM03M000227
GO:0043414IEAPLAZA Homologymacromolecule methylationHOM03M000227
GO:0008213IEAPLAZA Homologyprotein alkylationHOM03M000227
GO:0016569IEAPLAZA Homologycovalent chromatin modificationHOM03M000227
GO:0016568IEAPLAZA Homologychromatin modificationHOM03M000227

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0042054ISSUniProthistone methyltransferase activity1 2 3 4
GO:0003677IEAUniProtDNA binding1 2 3
GO:0018024IEAUniProthistone-lysine N-methyltransferase activity1 2 3
GO:0008270IEAUniProtzinc ion binding1 2 3
GO:0005515IEAInterProprotein binding
GO:0042393IEAInterProhistone binding
GO:0008168IEAPLAZA Homologymethyltransferase activityHOM03M000227
GO:0008757IEAPLAZA HomologyS-adenosylmethionine-dependent methyltransferase activityHOM03M000227
GO:0008170IEAPLAZA HomologyN-methyltransferase activityHOM03M000227
GO:0008276IEAPLAZA Homologyprotein methyltransferase activityHOM03M000227
GO:0016278IEAPLAZA Homologylysine N-methyltransferase activityHOM03M000227
GO:0016279IEAPLAZA Homologyprotein-lysine N-methyltransferase activityHOM03M000227

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, ISMUniProtnucleus1 2 3 4
GO:0000775IEAUniProtchromosome, centromeric region1 2 3

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR007728Pre-SET domain
IPR003105SRA-YDG
IPR025794Histone H3-K9 methyltransferase, plant
IPR001214SET domain
IPR003606Pre-SET zinc-binding sub-group
IPR015947PUA-like domain
IPR003616Post-SET domain

Mapman id Description
27.3.69RNA.regulation of transcription.SET-domain transcriptional regulator family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBSET