Gene: AT2G04450 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT2G04450
- Transcript Identifier
- AT2G04450.1
- Gene Type
- Coding gene
- Location
- 2 : 1543710-1545319 : positive
Family
- Gene family
- Subfamily
- Duplication type
- Tandem duplicate
Descriptions
- Description
-
nudix hydrolase homolog 6
- Curated Summary
-
Encodes a protein with NADH pyrophosphatase activity. Although this protein was also shown to have ADP-ribose diphosphatase activity in vitro, mutant analyses suggest that NUDX6 is involved in NADH metabolism in vivo.
Identifiers
Identifier | Name |
---|---|
alias | ATNUDT6 |
alias | Arabidopsis thaliana nucleoside diphosphate linked to some moiety X 6 |
alias | nudix hydrolase homolog 6 |
alias | NUDX6 |
alias | NUDT6 |
alias | nucleoside diphosphates linked to some moiety X 6 |
alias | ATNUDX6 |
uniprot | Q9SJC4 |
Toolbox
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- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
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Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0051707 | IEP | UniProt | response to other organism | 1 2 3 |
GO:0080151 | IEP | UniProt | positive regulation of salicylic acid mediated signaling pathway | 1 2 3 |
GO:0000165 | RCA | Gene Ontology | MAPK cascade | 1 |
GO:0006612 | RCA | Gene Ontology | protein targeting to membrane | 1 |
GO:0009595 | RCA | Gene Ontology | detection of biotic stimulus | 1 |
GO:0009627 | RCA | Gene Ontology | systemic acquired resistance | 1 |
GO:0009697 | RCA | Gene Ontology | salicylic acid biosynthetic process | 1 |
GO:0009862 | RCA | Gene Ontology | systemic acquired resistance, salicylic acid mediated signaling pathway | 1 |
GO:0009867 | RCA | Gene Ontology | jasmonic acid mediated signaling pathway | 1 |
GO:0010200 | RCA | Gene Ontology | response to chitin | 1 |
GO:0010310 | RCA | Gene Ontology | regulation of hydrogen peroxide metabolic process | 1 |
GO:0010363 | RCA | Gene Ontology | regulation of plant-type hypersensitive response | 1 |
GO:0031348 | RCA | Gene Ontology | negative regulation of defense response | 1 |
GO:0034976 | RCA | Gene Ontology | response to endoplasmic reticulum stress | 1 |
GO:0042742 | RCA | Gene Ontology | defense response to bacterium | 1 |
GO:0043900 | RCA | Gene Ontology | regulation of multi-organism process | 1 |
GO:0045088 | RCA | Gene Ontology | regulation of innate immune response | 1 |
GO:0050832 | RCA | Gene Ontology | defense response to fungus | 1 |
GO:0070212 | ISO | PLAZA Integrative Orthology | protein poly-ADP-ribosylation | AT4G12720 |
GO:0010581 | ISO | PLAZA Integrative Orthology | regulation of starch biosynthetic process | AT4G12720 |
GO:0009870 | ISO | PLAZA Integrative Orthology | defense response signaling pathway, resistance gene-dependent | AT4G12720 |
GO:0009626 | ISO | PLAZA Integrative Orthology | plant-type hypersensitive response | AT4G12720 |
GO:0010193 | ISO | PLAZA Integrative Orthology | response to ozone | AT4G12720 |
GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | AT4G12720 |
GO:0006979 | ISO | PLAZA Integrative Orthology | response to oxidative stress | AT4G12720 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0016787 | ISS, IEA | Gene Ontology | hydrolase activity | 1 |
GO:0047631 | IDA | UniProt | ADP-ribose diphosphatase activity | 1 2 3 |
GO:0051287 | IDA | UniProt | NAD binding | 1 2 3 |
GO:0035529 | IDA | UniProt | NADH pyrophosphatase activity | 1 2 3 |
GO:0046872 | IEA | UniProt | metal ion binding | 1 2 |
GO:0000210 | IEA | UniProt | NAD+ diphosphatase activity | 1 2 |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G12720 |
GO:0017110 | ISO | PLAZA Integrative Orthology | nucleoside-diphosphatase activity | AT4G12720 |
GO:0080042 | ISO | PLAZA Integrative Orthology | ADP-glucose pyrophosphohydrolase activity | AT4G12720 |
GO:0080041 | ISO | PLAZA Integrative Orthology | ADP-ribose pyrophosphohydrolase activity | AT4G12720 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005829 | RCA | Gene Ontology | cytosol | 1 |
GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT4G12720 |
GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT4G12720 |
GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT4G12720 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
Mapman id | Description |
---|---|
23.3.3 | nucleotide metabolism.salvage.NUDIX hydrolases |
No SignalP domains detected for this gene.