Gene: AT2G04160 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT2G04160
- Transcript Identifier
- AT2G04160.1
- Gene Type
- Coding gene
- Location
- 2 : 1401450-1407694 : negative
Family
- Gene family
- Subfamily
Descriptions
- Description
-
Subtilisin-like serine endopeptidase family protein
- Curated Summary
-
isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein similar to subtilisin-like serine protease which is believed to be active outside the plant cell.
Identifiers
Identifier | Name |
---|---|
alias | AIR3 |
alias | AUXIN-INDUCED IN ROOT CULTURES 3 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0006508 | ISS, IEA | Gene Ontology | proteolysis | 1 |
GO:0008152 | IBA | Gene Ontology | metabolic process | 1 |
GO:0009733 | IEP | Gene Ontology | response to auxin | 1 |
GO:0010102 | IEP | Gene Ontology | lateral root morphogenesis | 1 |
GO:0019761 | RCA | Gene Ontology | glucosinolate biosynthetic process | 1 |
GO:0043086 | IEA | InterPro | negative regulation of catalytic activity | |
GO:0065009 | IEA | PLAZA Homology | regulation of molecular function | HOM03M000038 |
GO:0019222 | IEA | PLAZA Homology | regulation of metabolic process | HOM03M000038 |
GO:0065007 | IEA | PLAZA Homology | biological regulation | HOM03M000038 |
GO:0044092 | IEA | PLAZA Homology | negative regulation of molecular function | HOM03M000038 |
GO:0050790 | IEA | PLAZA Homology | regulation of catalytic activity | HOM03M000038 |
GO:0050789 | IEA | PLAZA Homology | regulation of biological process | HOM03M000038 |
GO:0071704 | IEA | PLAZA Homology | organic substance metabolic process | HOM03M000038 |
GO:0043170 | IEA | PLAZA Homology | macromolecule metabolic process | HOM03M000038 |
GO:0019538 | IEA | PLAZA Homology | protein metabolic process | HOM03M000038 |
GO:0044238 | IEA | PLAZA Homology | primary metabolic process | HOM03M000038 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0004252 | IBA, ISS, IEA | Gene Ontology | serine-type endopeptidase activity | 1 2 |
GO:0042802 | IEA | InterPro | identical protein binding | |
GO:0005515 | IEA | PLAZA Homology | protein binding | HOM03M000038 |
GO:0003824 | IEA | PLAZA Homology | catalytic activity | HOM03M000038 |
GO:0070011 | IEA | PLAZA Homology | peptidase activity, acting on L-amino acid peptides | HOM03M000038 |
GO:0004175 | IEA | PLAZA Homology | endopeptidase activity | HOM03M000038 |
GO:0016787 | IEA | PLAZA Homology | hydrolase activity | HOM03M000038 |
GO:0008236 | IEA | PLAZA Homology | serine-type peptidase activity | HOM03M000038 |
GO:0008233 | IEA | PLAZA Homology | peptidase activity | HOM03M000038 |
GO:0017171 | IEA | PLAZA Homology | serine hydrolase activity | HOM03M000038 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005576 | ISM | Gene Ontology | extracellular region | 1 |
GO:0005618 | IBA | Gene Ontology | cell wall | 1 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
Mapman id | Description |
---|---|
29.5.1 | protein.degradation.subtilases |
SignalP | Description |
---|---|
SignalP-noTM | Signal Peptide detected using noTM network |