PLAZA 3.0 Monocots gene overview : AT2G03200

Gene: AT2G03200 (Arabidopsis thaliana)

Overview

Gene Identifier: AT2G03200
Transcript Identifier: AT2G03200.1
Gene Type: Coding gene
Location: 2 : 966506-967891 : negative

Family

Gene family: HOM03M000031
(1041 genes in 16 species)
specific family
Subfamily: ORTHO03M007720
(5 genes in 4 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description: Eukaryotic aspartyl protease family protein

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Identifiers

Identifier	Name

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...the gene in Genomeview, a genome browser
...all colinear gene pairs.

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006508	ISS, IEA	Gene Ontology	proteolysis	1
GO:0000041	RCA	Gene Ontology	transition metal ion transport	1
GO:0010228	RCA	Gene Ontology	vegetative to reproductive phase transition of meristem	1
GO:0010413	RCA	Gene Ontology	glucuronoxylan metabolic process	1
GO:0016926	RCA	Gene Ontology	protein desumoylation	1
GO:0045492	RCA	Gene Ontology	xylan biosynthetic process	1
GO:0050665	RCA	Gene Ontology	hydrogen peroxide biosynthetic process	1
GO:0008152	IEA	PLAZA Homology	metabolic process	HOM03M000031
GO:0071704	IEA	PLAZA Homology	organic substance metabolic process	HOM03M000031
GO:0043170	IEA	PLAZA Homology	macromolecule metabolic process	HOM03M000031
GO:0019538	IEA	PLAZA Homology	protein metabolic process	HOM03M000031
GO:0044238	IEA	PLAZA Homology	primary metabolic process	HOM03M000031

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004190	IEA	InterPro	aspartic-type endopeptidase activity
GO:0070011	IEA	PLAZA Homology	peptidase activity, acting on L-amino acid peptides	HOM03M000031
GO:0004175	IEA	PLAZA Homology	endopeptidase activity	HOM03M000031
GO:0016787	IEA	PLAZA Homology	hydrolase activity	HOM03M000031
GO:0070001	IEA	PLAZA Homology	aspartic-type peptidase activity	HOM03M000031
GO:0008233	IEA	PLAZA Homology	peptidase activity	HOM03M000031
GO:0003824	IEA	PLAZA Homology	catalytic activity	HOM03M000031

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005576	ISM	Gene Ontology	extracellular region	1

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR021109	Aspartic peptidase domain
IPR001461	Aspartic peptidase

Mapman id	Description
29.5.4	protein.degradation.aspartate protease

SignalP	Description
SignalP-noTM	Signal Peptide detected using noTM network