PLAZA 3.0 Monocots gene overview : AT2G02955

Gene: AT2G02955 (Arabidopsis thaliana)

Overview

Gene Identifier: AT2G02955
Transcript Identifier: AT2G02955.1
Gene Type: Coding gene
Location: 2 : 859592-861772 : positive

Family

Gene family: HOM03M004619
(21 genes in 15 species)
specific family

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Descriptions

Description: maternal effect embryo arrest 12

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Identifiers

Identifier	Name
alias	MEE12
alias	maternal effect embryo arrest 12
uniprot	Q5XVF0

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...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0009793	IMP	UniProt	embryo development ending in seed dormancy	1 2 3

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0046872	IEA	UniProt	metal ion binding	1 2
GO:0001164	ISS	UniProt	RNA polymerase I CORE element sequence-specific DNA binding	1 2
GO:0001187	ISS	UniProt	RNA polymerase I CORE element sequence-specific DNA binding transcription factor recruiting transcription factor activity	1 2
GO:0001167	IEA	PLAZA Homology	sequence-specific DNA binding RNA polymerase I transcription factor activity	HOM03M004619
GO:0001163	IEA	PLAZA Homology	RNA polymerase I regulatory region sequence-specific DNA binding	HOM03M004619
GO:0001013	IEA	PLAZA Homology	RNA polymerase I regulatory region DNA binding	HOM03M004619
GO:0001134	IEA	PLAZA Homology	transcription factor recruiting transcription factor activity	HOM03M004619
GO:0001169	IEA	PLAZA Homology	RNA polymerase I CORE element sequence-specific DNA binding transcription factor activity	HOM03M004619
GO:0001082	IEA	PLAZA Homology	RNA polymerase I transcription factor binding transcription factor activity	HOM03M004619
GO:0001186	IEA	PLAZA Homology	RNA polymerase I transcription factor recruiting transcription factor activity	HOM03M004619

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	ISM	Gene Ontology	nucleus	1
GO:0005730	IEA	UniProt	nucleolus	1 2

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Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR021752	Transcription initiation factor Rrn7

Mapman id	Description
35.2	not assigned.unknown

No SignalP domains detected for this gene.