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WorkbenchGene: AT1G79040 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT1G79040
- Transcript Identifier
- AT1G79040.1
- Gene Type
- Coding gene
- Location
- 1 : 29736085-29736781 : positive
Family
- Gene family
- Subfamily
Descriptions
- Description
-
photosystem II subunit R
- Curated Summary
-
Encodes for the 10 kDa PsbR subunit of photosystem II (PSII). This subunit appears to be involved in the stable assembly of PSII, particularly that of the oxygen-evolving complex subunit PsbP. Mutants defective in this gene have reduced amounts of subunits PsbP and PsbQ in PSII. In turn, assembly of PsbR is dependent on the presence of PsbJ.
Identifiers
| Identifier | Name |
|---|---|
| alias | photosystem II subunit R |
| alias | PSBR |
| uniprot | P27202 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0015979 | ISS, IEA | Gene Ontology | photosynthesis | 1 |
| GO:0010270 | IEP | UniProt | photosystem II oxygen evolving complex assembly | 1 2 3 4 5 6 |
| GO:0009637 | RCA | Gene Ontology | response to blue light | 1 |
| GO:0009644 | RCA | Gene Ontology | response to high light intensity | 1 |
| GO:0009744 | RCA | Gene Ontology | response to sucrose | 1 |
| GO:0010114 | RCA | Gene Ontology | response to red light | 1 |
| GO:0010155 | RCA | Gene Ontology | regulation of proton transport | 1 |
| GO:0010218 | RCA | Gene Ontology | response to far red light | 1 |
| GO:0019344 | RCA | Gene Ontology | cysteine biosynthetic process | 1 |
Molecular Function
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0005515 | IPI | Gene Ontology | protein binding | 1 |
Cellular Component
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0009507 | IDA, ISM | Gene Ontology | chloroplast | 1 2 |
| GO:0009523 | ISS, IEA | Gene Ontology | photosystem II | 1 |
| GO:0009535 | IDA | UniProt | chloroplast thylakoid membrane | 1 2 3 4 5 6 |
| GO:0009579 | IDA | Gene Ontology | thylakoid | 1 |
| GO:0009534 | IDA | Gene Ontology | chloroplast thylakoid | 1 |
| GO:0009654 | IEA | UniProt | photosystem II oxygen evolving complex | 1 2 3 4 5 |
| GO:0042651 | IEA | InterPro | thylakoid membrane |
Color Legend
| Experimental Evidence |
| Electronic Evidence |
| Computational Reviewed Evidence |
| Mapman id | Description |
|---|---|
| 1.1.1.2 | PS.lightreaction.photosystem II.PSII polypeptide subunits |
No SignalP domains detected for this gene.