PLAZA 3.0 Monocots gene overview : AT1G77740

Gene: AT1G77740 (Arabidopsis thaliana)

Overview

Gene Identifier: AT1G77740
Transcript Identifier: AT1G77740.1
Gene Type: Coding gene
Location: 1 : 29220632-29223861 : positive

Family

Gene family: HOM03M000338
(172 genes in 16 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description: phosphatidylinositol-4-phosphate 5-kinase 2

Curated Summary: Encodes PIP5K2, a phosphatidylinositol-4-phosphate 5-kinase (PtdIns(4)P 5-kinase 2; or PIP5K2 that is involved in regulating lateral root formation and root gravity response.

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Identifiers

Identifier	Name
alias	PIP5K2
alias	phosphatidylinositol-4-phosphate 5-kinase 2
uniprot	Q8L796

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Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0003006	IMP	UniProt	developmental process involved in reproduction	1 2 3 4 5
GO:0040007	IMP	UniProt	growth	1 2 3 4 5
GO:0009958	IMP	UniProt	positive gravitropism	1 2 3 4 5
GO:0010311	IMP	UniProt	lateral root formation	1 2 3 4 5
GO:0046488	IEA	InterPro	phosphatidylinositol metabolic process
GO:0006650	IEA	PLAZA Homology	glycerophospholipid metabolic process	HOM03M000338
GO:0046486	IEA	PLAZA Homology	glycerolipid metabolic process	HOM03M000338
GO:0006644	IEA	PLAZA Homology	phospholipid metabolic process	HOM03M000338

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0016308	IDA, ISS,	UniProt	1-phosphatidylinositol-4-phosphate 5-kinase activity	1 2 3 4 5 6
GO:0005515	IPI	Gene Ontology	protein binding	1
GO:0005524	IEA	UniProt	ATP binding	1 2 3 4
GO:0016307	IEA	InterPro	phosphatidylinositol phosphate kinase activity

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005886	IDA	UniProt	plasma membrane	1 2 3 4 5

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR003409	MORN motif
IPR027483	Phosphatidylinositol-4-phosphate 5-kinase, C-terminal
IPR016034	Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup
IPR023610	Phosphatidylinositol-4-phosphate 5-kinase
IPR027484	Phosphatidylinositol-4-phosphate 5-kinase, N-terminal domain
IPR002498	Phosphatidylinositol-4-phosphate 5-kinase, core

Mapman id	Description
30.4.1	signalling.phosphinositides.phosphatidylinositol-4-phosphate 5-kinase

No SignalP domains detected for this gene.