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WorkbenchGene: AT1G77440 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT1G77440
- Transcript Identifier
- AT1G77440.1
- Gene Type
- Coding gene
- Location
- 1 : 29096334-29098105 : positive
Family
- Gene family
- Duplication type
- Block duplicate
Descriptions
- Description
-
20S proteasome beta subunit C2
- Curated Summary
-
Encodes beta subunit of 20s proteosome complex which is involved in protein degradation.
Identifiers
| Identifier | Name |
|---|---|
| alias | PBC2 |
| alias | 20S proteasome beta subunit C2 |
| uniprot | O81153 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0006511 | TAS | Gene Ontology | ubiquitin-dependent protein catabolic process | 1 |
| GO:0006635 | RCA | Gene Ontology | fatty acid beta-oxidation | 1 |
| GO:0009640 | RCA | Gene Ontology | photomorphogenesis | 1 |
| GO:0010388 | RCA | Gene Ontology | cullin deneddylation | 1 |
| GO:0043161 | RCA | Gene Ontology | proteasome-mediated ubiquitin-dependent protein catabolic process | 1 |
| GO:0043248 | RCA | Gene Ontology | proteasome assembly | 1 |
| GO:0051788 | RCA | Gene Ontology | response to misfolded protein | 1 |
| GO:0051603 | IEA | UniProt | proteolysis involved in cellular protein catabolic process | 1 2 3 4 5 6 |
Molecular Function
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0008233 | ISS | Gene Ontology | peptidase activity | 1 |
| GO:0004298 | IEA | UniProt | threonine-type endopeptidase activity | 1 2 3 4 5 6 |
| GO:0004175 | IEA | InterPro | endopeptidase activity | |
| GO:0070003 | IEA | PLAZA Homology | threonine-type peptidase activity | HOM03M003045 |
Cellular Component
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0005737 | IEA, ISM | UniProt | cytoplasm | 1 2 3 4 5 6 7 |
| GO:0000502 | IDA | UniProt | proteasome complex | 1 2 3 4 5 6 7 |
| GO:0005829 | RCA | Gene Ontology | cytosol | 1 |
| GO:0005839 | IEA, TAS | UniProt | proteasome core complex | 1 2 3 4 5 6 7 |
| GO:0005634 | IEA | UniProt | nucleus | 1 2 3 4 5 6 |
Color Legend
| Experimental Evidence |
| Electronic Evidence |
| Computational Reviewed Evidence |
| Mapman id | Description |
|---|---|
| 29.5.11.20 | protein.degradation.ubiquitin.proteasom |
No SignalP domains detected for this gene.