Gene: AT1G73100 (Arabidopsis thaliana)

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Gene Identifier
AT1G73100
Transcript Identifier
AT1G73100.1
Gene Type
Coding gene
Location
1 : 27491970-27493979 : positive

Family

Gene family
HOM03M000227
(223 genes in 15 species)
specific family
Subfamily
ORTHO03M000948
(11 genes in 7 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
SU(VAR)3-9 homolog 3
Curated Summary
Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain.
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Identifiers

Identifier Name
aliasSDG19
aliasSUVH3
aliasSET DOMAIN PROTEIN 19
aliasSU(VAR)3-9 homolog 3
uniprotQ9C5P4

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0040029TASUniProtregulation of gene expression, epigenetic1 2 3 4 5
GO:0016571IEAInterProhistone methylation
GO:0034968IEAInterProhistone lysine methylation
GO:0006325IEAPLAZA Homologychromatin organizationHOM03M000227
GO:0032259IEAPLAZA HomologymethylationHOM03M000227
GO:0051276IEAPLAZA Homologychromosome organizationHOM03M000227
GO:0006479IEAPLAZA Homologyprotein methylationHOM03M000227
GO:0016570IEAPLAZA Homologyhistone modificationHOM03M000227
GO:0043414IEAPLAZA Homologymacromolecule methylationHOM03M000227
GO:0008213IEAPLAZA Homologyprotein alkylationHOM03M000227
GO:0016569IEAPLAZA Homologycovalent chromatin modificationHOM03M000227
GO:0016568IEAPLAZA Homologychromatin modificationHOM03M000227

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0042054ISSUniProthistone methyltransferase activity1 2 3 4 5
GO:0003677IEAUniProtDNA binding1 2 3 4
GO:0018024IEAUniProthistone-lysine N-methyltransferase activity1 2 3 4
GO:0008270IEAUniProtzinc ion binding1 2 3 4
GO:0005515IEAInterProprotein binding
GO:0042393IEAInterProhistone binding
GO:0008168IEAPLAZA Homologymethyltransferase activityHOM03M000227
GO:0008757IEAPLAZA HomologyS-adenosylmethionine-dependent methyltransferase activityHOM03M000227
GO:0008170IEAPLAZA HomologyN-methyltransferase activityHOM03M000227
GO:0008276IEAPLAZA Homologyprotein methyltransferase activityHOM03M000227
GO:0016278IEAPLAZA Homologylysine N-methyltransferase activityHOM03M000227
GO:0016279IEAPLAZA Homologyprotein-lysine N-methyltransferase activityHOM03M000227

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISMIEA, UniProtnucleus1 2 3 4 5 6
GO:0005694IDAUniProtchromosome1 2 3 4 5
GO:0000775IEAUniProtchromosome, centromeric region1 2 3 4

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001214SET domain
IPR015947PUA-like domain
IPR025794Histone H3-K9 methyltransferase, plant
IPR003105SRA-YDG
IPR003606Pre-SET zinc-binding sub-group
IPR003616Post-SET domain
IPR007728Pre-SET domain

Mapman id Description
27.3.69RNA.regulation of transcription.SET-domain transcriptional regulator family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBSET