PLAZA 3.0 Monocots gene overview : AT1G65610

Gene: AT1G65610 (Arabidopsis thaliana)

Overview

Gene Identifier: AT1G65610
Transcript Identifier: AT1G65610.1
Gene Type: Coding gene
Location: 1 : 24391823-24395261 : negative

Family

Gene family: HOM03M000128
(366 genes in 15 species)
specific family

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Descriptions

Description: Six-hairpin glycosidases superfamily protein

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Identifiers

Identifier	Name
alias	KORRIGAN 2
alias	KOR2
alias	ATGH9A2
alias	ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A2
uniprot	O04478

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0030245	IEA	UniProt	cellulose catabolic process	1 2 3
GO:0005975	IEA	InterPro	carbohydrate metabolic process

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004553	ISS, IEA	Gene Ontology	hydrolase activity, hydrolyzing O-glycosyl compounds	1
GO:0008810	IEA	UniProt	cellulase activity	1 2 3
GO:0003824	IEA	InterPro	catalytic activity
GO:0016787	IEA	PLAZA Homology	hydrolase activity	HOM03M000128
GO:0016798	IEA	PLAZA Homology	hydrolase activity, acting on glycosyl bonds	HOM03M000128

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005886	ISM	Gene Ontology	plasma membrane	1
GO:0016021	IEA	UniProt	integral to membrane	1 2 3

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR018221	Glycoside hydrolase, family 9, active site
IPR008928	Six-hairpin glycosidase-like
IPR012341	Six-hairpin glycosidase
IPR001701	Glycoside hydrolase, family 9

Mapman id	Description
26.3.4	misc.gluco-, galacto- and mannosidases.endoglucanase

No SignalP domains detected for this gene.