Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchGene: AT1G64628 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT1G64628
- Transcript Identifier
- AT1G64628.1
- Gene Type
- Coding gene
- Location
- 1 : 24019624-24019839 : positive
Family
- Gene family
Descriptions
- Description
-
conserved peptide upstream open reading frame 57
- Curated Summary
-
Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF57 represents a conserved upstream opening reading frame relative to major ORF AT1G64630.1
Identifiers
| Identifier | Name |
|---|---|
| alias | conserved peptide upstream open reading frame 57 |
| alias | CPuORF57 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
- ...sequences.
- ...the multiple sequence alignment of the gene family with BioJS
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBIs protein database.
- ...the gene in Genomeview, a genome browser
- ...all colinear gene pairs.
Cellular Component
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0005739 | ISM | Gene Ontology | mitochondrion | 1 |
Color Legend
| Experimental Evidence |
| Electronic Evidence |
| Computational Reviewed Evidence |
No InterPro domains detected for this gene.
| Mapman id | Description |
|---|---|
| 35.2 | not assigned.unknown |
No SignalP domains detected for this gene.