Gene: AT1G63970 (Arabidopsis thaliana)

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Gene Identifier
AT1G63970
Transcript Identifier
AT1G63970.1
Gene Type
Coding gene
Location
1 : 23738923-23740336 : negative

Family

Gene family
HOM03M005207
(19 genes in 16 species)
specific family

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Descriptions

Description
isoprenoid F
Curated Summary
Encodes a protein with 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity. The protein's activity was confirmed by heterologous expression of phenotypic complementation of the E. coli ispF mutant. Plants defective in this gene display an albino lethal phenotype.Homolog of E. coli IspF
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Identifiers

Identifier Name
alias2C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE
aliasisoprenoid F
aliasISPF
aliasMECPS
uniprotQ9CAK8

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0019288IEA, ISS, RCAUniProtisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1 2 3 4 5 6 7 8
GO:0015995IMP, RCA, UniProtchlorophyll biosynthetic process1 2 3 4 5 6 7 8
GO:0016117IMP, RCA, UniProtcarotenoid biosynthetic process1 2 3 4 5 6 7 8
GO:0006098RCAGene Ontologypentose-phosphate shunt1
GO:0006364RCAGene OntologyrRNA processing1
GO:0006636RCAGene Ontologyunsaturated fatty acid biosynthetic process1
GO:0006655RCAGene Ontologyphosphatidylglycerol biosynthetic process1
GO:0006744RCAGene Ontologyubiquinone biosynthetic process1
GO:0009073RCAGene Ontologyaromatic amino acid family biosynthetic process1
GO:0009637RCAGene Ontologyresponse to blue light1
GO:0009644RCAGene Ontologyresponse to high light intensity1
GO:0009744RCAGene Ontologyresponse to sucrose1
GO:0009965RCAGene Ontologyleaf morphogenesis1
GO:0010027RCAGene Ontologythylakoid membrane organization1
GO:0010114RCAGene Ontologyresponse to red light1
GO:0010155RCAGene Ontologyregulation of proton transport1
GO:0010218RCAGene Ontologyresponse to far red light1
GO:0019344RCAGene Ontologycysteine biosynthetic process1
GO:0030154RCAGene Ontologycell differentiation1
GO:0045893RCAGene Ontologypositive regulation of transcription, DNA-dependent1
GO:0016114IEAInterProterpenoid biosynthetic process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008685IGI, ISSIEA, UniProt2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity1 2 3 4 5 6 7 8
GO:0046872IEAUniProtmetal ion binding1 2 3 4 5 6

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507IDA, ISMGene Ontologychloroplast1 2
GO:0009570IDAUniProtchloroplast stroma1 2 3 4 5 6 7

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR0035262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
IPR0205552-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site

Mapman id Description
16.1.1.5secondary metabolism.isoprenoids.non-mevalonate pathway.MCS
No SignalP domains detected for this gene.