Gene: AT1G56170 (Arabidopsis thaliana)

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Gene Identifier
AT1G56170
Transcript Identifier
AT1G56170.1
Gene Type
Coding gene
Location
1 : 21025118-21025717 : positive

Family

Gene family
HOM03M000450
(140 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
nuclear factor Y, subunit C2
Curated Summary
Encodes a protein with similarity to a subunit of the CCAAT promoter motif binding complex of yeast.One of two members of this class (HAP5B) and expressed in vegetative and reproductive tissues
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Identifiers

Identifier Name
aliasNF-YC2
alias'nuclear factor Y, subunit C2'
aliasATHAP5B
aliasHAP5B
uniprotQ8LCG7

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355ISS, IEAGene Ontologyregulation of transcription, DNA-dependent1
GO:0045893IDAUniProtpositive regulation of transcription, DNA-dependent1 2 3 4 5 6
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4 5
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000450

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677ISSGene OntologyDNA binding1
GO:0003700ISS, IEA, UniProtsequence-specific DNA binding transcription factor activity1 2 3 4 5 6
GO:0043565IEAUniProtsequence-specific DNA binding1 2 3 4 5
GO:0046982IEAInterProprotein heterodimerization activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISM, ISSGene Ontologynucleus1 2 3
GO:0005737IDAUniProtcytoplasm1 2 3 4 5 6
GO:0016602ISS, IEA, UniProtCCAAT-binding factor complex1 2 3 4 5 6
GO:0005622IEAInterProintracellular
GO:0005667IEAPLAZA Homologytranscription factor complexHOM03M000450
GO:0044798IEAPLAZA Homologynuclear transcription factor complexHOM03M000450

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR009072Histone-fold
IPR027170Transcriptional activator NFYC/HAP5 subunit
IPR003958Transcription factor CBF/NF-Y/archaeal histone

Mapman id Description
27.3.16RNA.regulation of transcription.CCAAT box binding factor family, HAP5
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBCCAAT
PlantTFDBNF-YC