Gene: AT1G56070 (Arabidopsis thaliana)

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Gene Identifier
AT1G56070
Transcript Identifier
AT1G56070.1
Gene Type
Coding gene
Location
1 : 20968245-20971077 : negative

Family

Gene family
HOM03M000661
(104 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Ribosomal protein S5/Elongation factor G/III/V family protein
Curated Summary
encodes a translation elongation factor 2-like protein that is involved in cold-induced translation. Mutations in this gene specifically blocks low temperature-induced transcription of cold-responsive genes but induces the expression of CBF genes and mutants carrying the recessive mutations fail to acclimate to cold and is freezing sensitive.
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Identifiers

Identifier Name
aliasLOS1
aliasLOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009409IMPGene Ontologyresponse to cold1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003746ISSGene Ontologytranslation elongation factor activity1
GO:0008135ISSGene Ontologytranslation factor activity, nucleic acid binding1
GO:0005507IDAGene Ontologycopper ion binding1
GO:0003924IEAInterProGTPase activity
GO:0005525IEAInterProGTP binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737ISMGene Ontologycytoplasm1
GO:0005730IDAGene Ontologynucleolus1
GO:0005774IDAGene Ontologyvacuolar membrane1
GO:0016020IDAGene Ontologymembrane1
GO:0005886IDAGene Ontologyplasma membrane1
GO:0009507IDAGene Ontologychloroplast1
GO:0005829IDAGene Ontologycytosol1
GO:0009506IDAGene Ontologyplasmodesma1
GO:0048046IDAGene Ontologyapoplast1
GO:0005794RCAGene OntologyGolgi apparatus1

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR005517Translation elongation factor EFG/EF2, domain IV
IPR009000Translation protein, beta-barrel domain
IPR000795Elongation factor, GTP-binding domain
IPR000640Translation elongation factor EFG, V domain
IPR009022Elongation factor G, III-V domain
IPR020568Ribosomal protein S5 domain 2-type fold
IPR014721Ribosomal protein S5 domain 2-type fold, subgroup
IPR004161Translation elongation factor EFTu/EF1A, domain 2
IPR005225Small GTP-binding protein domain

Mapman id Description
29.2.4protein.synthesis.elongation
No SignalP domains detected for this gene.