Gene: AT1G54780 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT1G54780
- Transcript Identifier
- AT1G54780.1
- Gene Type
- Coding gene
- Location
- 1 : 20439533-20440953 : positive
Family
- Gene family
Descriptions
- Description
-
thylakoid lumen 18.3 kDa protein
- Curated Summary
-
Encodes a thylakoid lumen protein regulating photosystem II repair cycle. Has acid phosphatase activity.
Identifiers
Identifier | Name |
---|---|
alias | TLP18.3 |
alias | AtTLP18.3 |
alias | thylakoid lumen protein 18.3 |
uniprot | Q9ZVL6 |
Toolbox
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0010206 | IMP | UniProt | photosystem II repair | 1 2 3 4 5 |
GO:0006364 | RCA | Gene Ontology | rRNA processing | 1 |
GO:0006636 | RCA | Gene Ontology | unsaturated fatty acid biosynthetic process | 1 |
GO:0009637 | RCA | Gene Ontology | response to blue light | 1 |
GO:0009657 | RCA | Gene Ontology | plastid organization | 1 |
GO:0009773 | RCA | Gene Ontology | photosynthetic electron transport in photosystem I | 1 |
GO:0010114 | RCA | Gene Ontology | response to red light | 1 |
GO:0010207 | RCA | Gene Ontology | photosystem II assembly | 1 |
GO:0010218 | RCA | Gene Ontology | response to far red light | 1 |
GO:0015979 | RCA | Gene Ontology | photosynthesis | 1 |
GO:0015995 | RCA | Gene Ontology | chlorophyll biosynthetic process | 1 |
GO:0016117 | RCA | Gene Ontology | carotenoid biosynthetic process | 1 |
GO:0019288 | RCA | Gene Ontology | isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1 |
GO:0019344 | RCA | Gene Ontology | cysteine biosynthetic process | 1 |
GO:0019684 | RCA | Gene Ontology | photosynthesis, light reaction | 1 |
GO:0019761 | RCA | Gene Ontology | glucosinolate biosynthetic process | 1 |
GO:0035304 | RCA | Gene Ontology | regulation of protein dephosphorylation | 1 |
Molecular Function
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0009507 | IDA, ISM | Gene Ontology | chloroplast | 1 2 |
GO:0009543 | IDA, ISS | Gene Ontology | chloroplast thylakoid lumen | 1 2 |
GO:0031977 | IDA | UniProt | thylakoid lumen | 1 2 3 4 5 |
GO:0009579 | IDA | Gene Ontology | thylakoid | 1 |
GO:0009535 | IDA | UniProt | chloroplast thylakoid membrane | 1 2 3 4 5 |
GO:0009534 | IDA | Gene Ontology | chloroplast thylakoid | 1 |
GO:0016021 | IEA | UniProt | integral to membrane | 1 2 3 4 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
Mapman id | Description |
---|---|
35.1 | not assigned.no ontology |
No SignalP domains detected for this gene.