Gene: AT1G54370 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G54370
Transcript Identifier
AT1G54370.1
Gene Type
Coding gene
Location
1 : 20293353-20297129 : negative

Family

Gene family
HOM03M000628
(108 genes in 16 species)
specific family
Subfamily
ORTHO03M005355
(6 genes in 6 species)
specific family

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Descriptions

Description
sodium hydrogen exchanger 5
Curated Summary
Encodes an endosomal Na(+)/H(+) antiporter: AT1G54370 (NHX5), AT1G79610 (NHX6). Double knockout nhx5 nhx6 showed reduced growth, with smaller and fewer cells and increased sensitivity to salinity.
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Identifiers

Identifier Name
aliasNHX5
aliasNA+/H+ ANTIPORTER 5
aliassodium hydrogen exchanger 5
aliasATNHX5
uniprotQ8S396

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006814IGI, ISS, RCA, IEAGene Ontologysodium ion transport1 2 3
GO:0035725IGI, ISSGene Ontologysodium ion transmembrane transport1 2
GO:0006635RCAGene Ontologyfatty acid beta-oxidation1
GO:0006869RCAGene Ontologylipid transport1
GO:0006891RCAGene Ontologyintra-Golgi vesicle-mediated transport1
GO:0010351IGI, RCA, UniProtlithium ion transport1 2 3 4 5
GO:0016558RCAGene Ontologyprotein import into peroxisome matrix1
GO:0006885IEAUniProtregulation of pH1 2 3
GO:0055085IEAInterProtransmembrane transport
GO:0006812IEAInterProcation transport
GO:0055067IEAPLAZA Homologymonovalent inorganic cation homeostasisHOM03M000628

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0015385IEA, ISSUniProtsodium:hydrogen antiporter activity1 2 3 4
GO:0015081IGIUniProtsodium ion transmembrane transporter activity1 2 3 4
GO:0015299IEAInterProsolute:hydrogen antiporter activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737ISMGene Ontologycytoplasm1
GO:0005768IDAUniProtendosome1 2 3 4
GO:0010008IEAUniProtendosome membrane1 2 3
GO:0032580IEAUniProtGolgi cisterna membrane1 2 3
GO:0016021IEAUniProtintegral to membrane1 2 3

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR006153Cation/H+ exchanger
IPR004709Na+/H+ exchanger
IPR018422Cation/H+ exchanger, CPA1 family

Mapman id Description
34.14transport.unspecified cations
No SignalP domains detected for this gene.