Gene: AT1G53160 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G53160
Transcript Identifier
AT1G53160.2
Gene Type
Coding gene
Location
1 : 19806478-19807080 : positive

Family

Gene family
HOM03M000136
(344 genes in 15 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
squamosa promoter binding protein-like 4
Curated Summary
Encodes a member of the SPL (squamosa-promoter binding protein-like)gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. Contains the SBP-box, which encodes the SBP-domain, required and sufficient for interaction with DNA. It is involved in regulation of flowering and vegetative phase change. Its temporal expression is regulated by the microRNA miR156. The target site for the microRNA is in the 3'UTR.
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Identifiers

Identifier Name
aliasFLORAL TRANSITION AT THE MERISTEM6
aliasSPL4
aliasFTM6
aliassquamosa promoter binding protein-like 4
uniprotQ9S7A9

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355TASGene Ontologyregulation of transcription, DNA-dependent1
GO:0010321IMPUniProtregulation of vegetative phase change1 2 3 4 5 6 7 8 9
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4 5 6 7 8

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEA, ISSUniProtDNA binding1 2 3 4 5 6 7 8 9
GO:0003700ISSUniProtsequence-specific DNA binding transcription factor activity1 2 3 4 5 6 7 8 9
GO:0046872IEAUniProtmetal ion binding1 2 3 4 5 6 7 8

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, ISM, ISSUniProtnucleus1 2 3 4 5 6 7 8 9 10
GO:0005737IEAUniProtcytoplasm1 2 3 4 5 6 7 8

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004333Transcription factor, SBP-box

Mapman id Description
33.3development.squamosa promoter binding like (SPL)
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBSBP
PlantTFDBSBP