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WorkbenchGene: AT1G51940 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT1G51940
- Transcript Identifier
- AT1G51940.1
- Gene Type
- Coding gene
- Location
- 1 : 19296092-19298941 : negative
Family
- Gene family
Descriptions
- Description
-
protein kinase family protein / peptidoglycan-binding LysM domain-containing protein
- Curated Summary
-
Encodes a LysM-containing receptor-like kinase. Induction of chitin-responsive genes by chitin treatment is not blocked in the mutant.
Identifiers
| Identifier | Name |
|---|---|
| alias | LysM-containing receptor-like kinase 3 |
| alias | LYK3 |
| uniprot | F4IB81 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0007020 | RCA | Gene Ontology | microtubule nucleation | 1 |
| GO:0016998 | IEA | UniProt | cell wall macromolecule catabolic process | 1 2 |
| GO:0006468 | IEA | InterPro | protein phosphorylation |
Molecular Function
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0016301 | ISS | Gene Ontology | kinase activity | 1 |
| GO:0005524 | IEA | UniProt | ATP binding | 1 2 |
| GO:0004674 | IEA | UniProt | protein serine/threonine kinase activity | 1 2 |
| GO:0004672 | IEA | InterPro | protein kinase activity | |
| GO:0016772 | IEA | InterPro | transferase activity, transferring phosphorus-containing groups |
Cellular Component
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0005886 | IEA, ISM | UniProt | plasma membrane | 1 2 3 |
| GO:0016021 | IEA | UniProt | integral to membrane | 1 2 |
Color Legend
| Experimental Evidence |
| Electronic Evidence |
| Computational Reviewed Evidence |
| InterPro | Description |
|---|---|
| IPR002290 | Serine/threonine- / dual specificity protein kinase, catalytic domain |
| IPR001245 | Serine-threonine/tyrosine-protein kinase catalytic domain |
| IPR013320 | Concanavalin A-like lectin/glucanase, subgroup |
| IPR000719 | Protein kinase domain |
| IPR018392 | LysM domain |
| IPR017441 | Protein kinase, ATP binding site |
| IPR008271 | Serine/threonine-protein kinase, active site |
| IPR011009 | Protein kinase-like domain |
| Mapman id | Description |
|---|---|
| 30.2.21 | signalling.receptor kinases.lysine motif |
| SignalP | Description |
|---|---|
| SignalP-noTM | Signal Peptide detected using noTM network |