Gene: AT1G50900 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G50900
Transcript Identifier
AT1G50900.1
Gene Type
Coding gene
Location
1 : 18866272-18867014 : positive

Family

Gene family
HOM03M005587
(18 genes in 15 species)
specific family

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Descriptions

Description
Ankyrin repeat family protein
Curated Summary
Encodes GDC1 (Grana Deficient Chloroplast 1), an ankyrin domain containing protein required fro chloroplast thylakoid grana formation.
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Identifiers

Identifier Name
aliasGrana Deficient Chloroplast 1
aliasLTD
aliasLHCP translocation defect
aliasGDC1
uniprotQ8VY88

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0080167IEPUniProtresponse to karrikin1 2 3 4 5
GO:0090391IMPUniProtgranum assembly1 2 3 4 5
GO:0006098RCAGene Ontologypentose-phosphate shunt1
GO:0006655RCAGene Ontologyphosphatidylglycerol biosynthetic process1
GO:0019288RCAGene Ontologyisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1
GO:0006886IDAUniProtintracellular protein transport1 2 3 4
GO:0019682IEAPLAZA Homologyglyceraldehyde-3-phosphate metabolic processHOM03M005587

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507IDA, ISMGene Ontologychloroplast1 2
GO:0009570IDAUniProtchloroplast stroma1 2 3 4 5
GO:0009941IDAUniProtchloroplast envelope1 2 3 4
GO:0009535IEAUniProtchloroplast thylakoid membrane1 2 3 4

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR020683Ankyrin repeat-containing domain
IPR002110Ankyrin repeat

Mapman id Description
35.2not assigned.unknown
No SignalP domains detected for this gene.