PLAZA 3.0 Monocots gene overview : AT1G48370

Gene: AT1G48370 (Arabidopsis thaliana)

Overview

Gene Identifier: AT1G48370
Transcript Identifier: AT1G48370.1
Gene Type: Coding gene
Location: 1 : 17874560-17877256 : positive

Family

Gene family: HOM03M000225
(204 genes in 13 species)
specific family
Subfamily: ORTHO03M000021
(60 genes in 13 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description: YELLOW STRIPE like 8

Curated Summary: Arabidopsis thaliana metal-nicotianamine transporter YSL4

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Identifiers

Identifier	Name
alias	YELLOW STRIPE like 8
alias	YSL8
uniprot	Q6R3K4

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006857	ISS	Gene Ontology	oligopeptide transport	1
GO:0055085	IEA	UniProt	transmembrane transport	1 2 3

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0015198	ISS	Gene Ontology	oligopeptide transporter activity	1

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005886	IDA	UniProt	plasma membrane	1 2 3 4
GO:0016021	IEA	UniProt	integral to membrane	1 2 3

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR004813	Oligopeptide transporter, OPT superfamily

Mapman id	Description
34.13	transport.peptides and oligopeptides

No SignalP domains detected for this gene.