PLAZA 3.0 Monocots gene overview : AT1G45050

Gene: AT1G45050 (Arabidopsis thaliana)

Overview

Gene Identifier: AT1G45050
Transcript Identifier: AT1G45050.1
Gene Type: Coding gene
Location: 1 : 17031337-17032967 : positive

Family

Gene family: HOM03M000077
(598 genes in 16 species)
specific family

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Descriptions

Description: Ubiquitin-conjugating enzyme family protein

Curated Summary: member of ubiquitin-conjugating E2-proteins

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Identifiers

Identifier	Name
alias	UBC15
alias	Arabidopsis thaliana ubiquitin-conjugating enzyme 15
alias	ATUBC2-1
uniprot	P42743

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006511	IDA, TAS,	UniProt	ubiquitin-dependent protein catabolic process	1 2 3 4 5
GO:0009910	IGI	UniProt	negative regulation of flower development	1 2 3 4
GO:0009965	IGI	UniProt	leaf morphogenesis	1 2 3 4
GO:0006635	RCA	Gene Ontology	fatty acid beta-oxidation	1
GO:0009407	RCA	Gene Ontology	toxin catabolic process	1
GO:0043161	RCA	Gene Ontology	proteasome-mediated ubiquitin-dependent protein catabolic process	1
GO:0051788	RCA	Gene Ontology	response to misfolded protein	1
GO:0080129	RCA	Gene Ontology	proteasome core complex assembly	1

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004842	IDA, ISS,	UniProt	ubiquitin-protein ligase activity	1 2 3 4 5
GO:0005524	IEA	UniProt	ATP binding	1 2 3
GO:0016881	IEA	InterPro	acid-amino acid ligase activity
GO:0016874	IEA	PLAZA Homology	ligase activity	HOM03M000077
GO:0016879	IEA	PLAZA Homology	ligase activity, forming carbon-nitrogen bonds	HOM03M000077
GO:0003824	IEA	PLAZA Homology	catalytic activity	HOM03M000077

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	ISM	Gene Ontology	nucleus	1

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR016135	Ubiquitin-conjugating enzyme/RWD-like
IPR000608	Ubiquitin-conjugating enzyme, E2
IPR023313	Ubiquitin-conjugating enzyme, active site

Mapman id	Description
29.5.11.3	protein.degradation.ubiquitin.E2

No SignalP domains detected for this gene.