Gene: AT1G33400 (Arabidopsis thaliana)

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Gene Identifier
AT1G33400
Transcript Identifier
AT1G33400.1
Gene Type
Coding gene
Location
1 : 12104891-12109488 : negative

Family

Gene family
HOM03M005128
(19 genes in 15 species)
specific family

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Descriptions

Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Curated Summary
Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.
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Identifiers

Identifier Name
aliasTPR9
aliastetratricopeptide repeat 9

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000394RCAGene OntologyRNA splicing, via endonucleolytic cleavage and ligation1
GO:0009086RCAGene Ontologymethionine biosynthetic process1
GO:0009616RCAGene Ontologyvirus induced gene silencing1
GO:0010050RCAGene Ontologyvegetative phase change1
GO:0010267RCAGene Ontologyproduction of ta-siRNAs involved in RNA interference1
GO:0035196RCAGene Ontologyproduction of miRNAs involved in gene silencing by miRNA1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISMGene Ontologynucleus1

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR019734Tetratricopeptide repeat
IPR001214SET domain
IPR011990Tetratricopeptide-like helical
IPR002893Zinc finger, MYND-type
IPR001440Tetratricopeptide TPR1
IPR013026Tetratricopeptide repeat-containing domain

Mapman id Description
35.1.27not assigned.no ontology.tetratricopeptide repeat (TPR)
No SignalP domains detected for this gene.