PLAZA 3.0 Monocots gene overview : AT1G27320

Gene: AT1G27320 (Arabidopsis thaliana)

Overview

Gene Identifier: AT1G27320
Transcript Identifier: AT1G27320.1
Gene Type: Coding gene
Location: 1 : 9487780-9492027 : positive

Family

Gene family: HOM03M000267
(200 genes in 16 species)
specific family

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Descriptions

Description: histidine kinase 3

Curated Summary: Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2.

Identifiers

Identifier	Name
alias	histidine kinase 3
alias	AHK3
alias	HK3
uniprot	Q9C5U1

Toolbox

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...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0009736	RCA, TAS	Gene Ontology	cytokinin-activated signaling pathway	1 2
GO:0016036	IMP	UniProt	cellular response to phosphate starvation	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27
GO:0071329	IMP	UniProt	cellular response to sucrose stimulus	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27
GO:0010029	IMP, RCA,	UniProt	regulation of seed germination	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28
GO:0010271	IMP	UniProt	regulation of chlorophyll catabolic process	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27
GO:0048831	IMP, RCA	Gene Ontology	regulation of shoot system development	1 2
GO:0010150	IMP	UniProt	leaf senescence	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27
GO:0006970	IMP	Gene Ontology	response to osmotic stress	1
GO:0009409	IEP	Gene Ontology	response to cold	1
GO:0009414	IEP	UniProt	response to water deprivation	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27
GO:0009651	IEP	UniProt	response to salt stress	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27
GO:0034757	IMP	UniProt	negative regulation of iron ion transport	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27
GO:0042742	IDA, IMP,	UniProt	defense response to bacterium	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28
GO:0010087	IMP	UniProt	phloem or xylem histogenesis	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27
GO:0080117	IMP	UniProt	secondary growth	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27
GO:0009909	IMP	UniProt	regulation of flower development	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27
GO:0048509	IMP	UniProt	regulation of meristem development	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27
GO:0070417	IMP	UniProt	cellular response to cold	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27
GO:0071215	IMP	UniProt	cellular response to abscisic acid stimulus	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27
GO:0000303	RCA	Gene Ontology	response to superoxide	1
GO:0006635	RCA	Gene Ontology	fatty acid beta-oxidation	1
GO:0007165	RCA, IEA	Gene Ontology	signal transduction	1
GO:0007623	RCA	Gene Ontology	circadian rhythm	1
GO:0008219	RCA	Gene Ontology	cell death	1
GO:0009755	RCA	Gene Ontology	hormone-mediated signaling pathway	1
GO:0009863	RCA	Gene Ontology	salicylic acid mediated signaling pathway	1
GO:0009873	RCA	Gene Ontology	ethylene mediated signaling pathway	1
GO:0016558	RCA	Gene Ontology	protein import into peroxisome matrix	1
GO:0031537	RCA	Gene Ontology	regulation of anthocyanin metabolic process	1
GO:0035556	IEA	UniProt	intracellular signal transduction	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26
GO:0006355	IEA	UniProt	regulation of transcription, DNA-dependent	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26
GO:0023014	IEA	UniProt	signal transduction by phosphorylation	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26
GO:0016310	IEA	InterPro	phosphorylation
GO:0000160	IEA	InterPro	phosphorelay signal transduction system
GO:2001141	IEA	PLAZA Homology	regulation of RNA biosynthetic process	HOM03M000267

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004673	IDA, IMPISS,	UniProt	protein histidine kinase activity	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
GO:0009884	TAS	UniProt	cytokinin receptor activity	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27
GO:0004721	IDA	Gene Ontology	phosphoprotein phosphatase activity	1
GO:0005515	IPI	Gene Ontology	protein binding	1
GO:0043424	IPI	Gene Ontology	protein histidine kinase binding	1
GO:0005034	IGI	UniProt	osmosensor activity	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27
GO:0005524	IEA	UniProt	ATP binding	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26
GO:0000156	IEA	UniProt	phosphorelay response regulator activity	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26
GO:0000155	IEA	UniProt	phosphorelay sensor kinase activity	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26
GO:0004871	IEA	InterPro	signal transducer activity
GO:0016772	IEA	InterPro	transferase activity, transferring phosphorus-containing groups
GO:0060089	IEA	PLAZA Homology	molecular transducer activity	HOM03M000267
GO:0016775	IEA	PLAZA Homology	phosphotransferase activity, nitrogenous group as acceptor	HOM03M000267
GO:0038023	IEA	PLAZA Homology	signaling receptor activity	HOM03M000267
GO:0004872	IEA	PLAZA Homology	receptor activity	HOM03M000267

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005886	ISS, IDA, ISM	UniProt	plasma membrane	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28
GO:0016021	IEA	UniProt	integral to membrane	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26
GO:0016020	IEA	InterPro	membrane

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR009082	Signal transduction histidine kinase, homodimeric domain
IPR006189	CHASE
IPR003594	Histidine kinase-like ATPase, ATP-binding domain
IPR004358	Signal transduction histidine kinase-related protein, C-terminal
IPR001789	Signal transduction response regulator, receiver domain
IPR005467	Signal transduction histidine kinase, core
IPR003661	Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain
IPR011006	CheY-like superfamily

Mapman id	Description
17.4.2	hormone metabolism.cytokinin.signal transduction

No SignalP domains detected for this gene.

Database	Type
PlnTFDB	Orphans