Gene: AT1G27080 (Arabidopsis thaliana)

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Gene Identifier
AT1G27080
Transcript Identifier
AT1G27080.1
Gene Type
Coding gene
Location
1 : 9400664-9403789 : positive

Family

Gene family
HOM03M000029
(1065 genes in 15 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description
nitrate transporter 1.6
Curated Summary
Encodes a protein with low-affinity nitrate transporter activity that is expressed in the vascular tissue of the funiculus and the silique. This plasma membrane-localized enzyme is predicted to have 12 transmembrane domains. Plants lacking NRT1.6 have reduced levels of nitrate in their seeds and have increased levels of early embryonic developmental defects and seed abortion.
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Identifiers

Identifier Name
aliasNRT1.6
aliasnitrate transporter 1.6
uniprotQ9LFX9

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009793IMPUniProtembryo development ending in seed dormancy1 2 3 4 5
GO:0010098IMPUniProtsuspensor development1 2 3 4 5
GO:0043562IEPUniProtcellular response to nitrogen levels1 2 3 4 5
GO:0048316IMPGene Ontologyseed development1
GO:0080055IDAUniProtlow affinity nitrate transport1 2 3 4 5
GO:0042128IEAUniProtnitrate assimilation1 2 3 4
GO:0006857IEAUniProtoligopeptide transport1 2 3 4
GO:0006810IEAInterProtransport
GO:0051234IEAPLAZA Homologyestablishment of localizationHOM03M000029
GO:0051179IEAPLAZA HomologylocalizationHOM03M000029

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005215ISS, IEAGene Ontologytransporter activity1
GO:0080054IDAUniProtlow affinity nitrate transmembrane transporter activity1 2 3 4 5
GO:0015293IEAUniProtsymporter activity1 2 3 4

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886IDA, ISM, UniProtplasma membrane1 2 3 4 5 6
GO:0016021IEAUniProtintegral to membrane1 2 3 4
GO:0016020IEAInterPromembrane

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR018456PTR2 family proton/oligopeptide symporter, conserved site
IPR016196Major facilitator superfamily domain, general substrate transporter
IPR000109Proton-dependent oligopeptide transporter family

Mapman id Description
34.13transport.peptides and oligopeptides
No SignalP domains detected for this gene.