Gene: AT1G24590 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT1G24590
- Transcript Identifier
- AT1G24590.1
- Gene Type
- Coding gene
- Location
- 1 : 8714389-8715309 : negative
Family
- Gene family
- Subfamily
- Duplication type
- Block duplicate
Descriptions
- Description
-
DORNROSCHEN-like
- Curated Summary
-
Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. This gene functions in the regeneration of shoots in tissue culture, probably through transcriptional regulation of CUC1. May also be involved in activation of the cell cycle via CycD1;1.
Identifiers
Identifier | Name |
---|---|
alias | DORNROSCHEN-like |
alias | DRNL |
alias | DORNROSCHEN-LIKE |
alias | SOB2 |
alias | ESR2 |
alias | DRN-LIKE |
alias | FOR SUPPRESSOR OF PHYTOCHROMEB-4 2 |
alias | ENHANCER OF SHOOT REGENERATION 2 |
uniprot | Q9FYK5 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
- ...sequences.
- ...the multiple sequence alignment of the gene family with BioJS
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBIs protein database.
- ...the gene in Genomeview, a genome browser
- ...all colinear gene pairs.
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0006355 | IMP, ISS, IEA | Gene Ontology | regulation of transcription, DNA-dependent | 1 2 |
GO:0051726 | IMP | UniProt | regulation of cell cycle | 1 2 3 4 5 6 |
GO:0009733 | IEP | UniProt | response to auxin | 1 2 3 4 5 6 |
GO:0009880 | IMP | UniProt | embryonic pattern specification | 1 2 3 4 5 6 |
GO:0048825 | IMP | UniProt | cotyledon development | 1 2 3 4 5 6 |
GO:0009736 | IEA | UniProt | cytokinin-activated signaling pathway | 1 2 3 4 5 |
GO:0009873 | IEA | UniProt | ethylene mediated signaling pathway | 1 2 3 4 5 |
GO:0009740 | IEA | UniProt | gibberellic acid mediated signaling pathway | 1 2 3 4 5 |
GO:0006351 | IEA | UniProt | transcription, DNA-templated | 1 2 3 4 5 |
GO:0010468 | IEA | PLAZA Homology | regulation of gene expression | HOM03M000014 |
GO:0006807 | IEA | PLAZA Homology | nitrogen compound metabolic process | HOM03M000014 |
GO:0010467 | IEA | PLAZA Homology | gene expression | HOM03M000014 |
GO:0051252 | IEA | PLAZA Homology | regulation of RNA metabolic process | HOM03M000014 |
GO:0051171 | IEA | PLAZA Homology | regulation of nitrogen compound metabolic process | HOM03M000014 |
GO:0044260 | IEA | PLAZA Homology | cellular macromolecule metabolic process | HOM03M000014 |
GO:0019222 | IEA | PLAZA Homology | regulation of metabolic process | HOM03M000014 |
GO:0019219 | IEA | PLAZA Homology | regulation of nucleobase-containing compound metabolic process | HOM03M000014 |
GO:0034641 | IEA | PLAZA Homology | cellular nitrogen compound metabolic process | HOM03M000014 |
GO:0034645 | IEA | PLAZA Homology | cellular macromolecule biosynthetic process | HOM03M000014 |
GO:0050789 | IEA | PLAZA Homology | regulation of biological process | HOM03M000014 |
GO:0009889 | IEA | PLAZA Homology | regulation of biosynthetic process | HOM03M000014 |
GO:0018130 | IEA | PLAZA Homology | heterocycle biosynthetic process | HOM03M000014 |
GO:0019438 | IEA | PLAZA Homology | aromatic compound biosynthetic process | HOM03M000014 |
GO:0043170 | IEA | PLAZA Homology | macromolecule metabolic process | HOM03M000014 |
GO:0046483 | IEA | PLAZA Homology | heterocycle metabolic process | HOM03M000014 |
GO:0016070 | IEA | PLAZA Homology | RNA metabolic process | HOM03M000014 |
GO:0009987 | IEA | PLAZA Homology | cellular process | HOM03M000014 |
GO:0044271 | IEA | PLAZA Homology | cellular nitrogen compound biosynthetic process | HOM03M000014 |
GO:0065007 | IEA | PLAZA Homology | biological regulation | HOM03M000014 |
GO:0010556 | IEA | PLAZA Homology | regulation of macromolecule biosynthetic process | HOM03M000014 |
GO:0006139 | IEA | PLAZA Homology | nucleobase-containing compound metabolic process | HOM03M000014 |
GO:0032774 | IEA | PLAZA Homology | RNA biosynthetic process | HOM03M000014 |
GO:0006725 | IEA | PLAZA Homology | cellular aromatic compound metabolic process | HOM03M000014 |
GO:1901576 | IEA | PLAZA Homology | organic substance biosynthetic process | HOM03M000014 |
GO:0090304 | IEA | PLAZA Homology | nucleic acid metabolic process | HOM03M000014 |
GO:0080090 | IEA | PLAZA Homology | regulation of primary metabolic process | HOM03M000014 |
GO:2001141 | IEA | PLAZA Homology | regulation of RNA biosynthetic process | HOM03M000014 |
GO:0044237 | IEA | PLAZA Homology | cellular metabolic process | HOM03M000014 |
GO:0044238 | IEA | PLAZA Homology | primary metabolic process | HOM03M000014 |
GO:0009058 | IEA | PLAZA Homology | biosynthetic process | HOM03M000014 |
GO:0009059 | IEA | PLAZA Homology | macromolecule biosynthetic process | HOM03M000014 |
GO:2000112 | IEA | PLAZA Homology | regulation of cellular macromolecule biosynthetic process | HOM03M000014 |
GO:0060255 | IEA | PLAZA Homology | regulation of macromolecule metabolic process | HOM03M000014 |
GO:0031323 | IEA | PLAZA Homology | regulation of cellular metabolic process | HOM03M000014 |
GO:0031326 | IEA | PLAZA Homology | regulation of cellular biosynthetic process | HOM03M000014 |
GO:1901360 | IEA | PLAZA Homology | organic cyclic compound metabolic process | HOM03M000014 |
GO:1901362 | IEA | PLAZA Homology | organic cyclic compound biosynthetic process | HOM03M000014 |
GO:0034654 | IEA | PLAZA Homology | nucleobase-containing compound biosynthetic process | HOM03M000014 |
GO:0050794 | IEA | PLAZA Homology | regulation of cellular process | HOM03M000014 |
GO:0008152 | IEA | PLAZA Homology | metabolic process | HOM03M000014 |
GO:0071704 | IEA | PLAZA Homology | organic substance metabolic process | HOM03M000014 |
GO:0044249 | IEA | PLAZA Homology | cellular biosynthetic process | HOM03M000014 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0003677 | IEA, ISS | UniProt | DNA binding | 1 2 3 4 5 6 |
GO:0003700 | ISS, IEA, | UniProt | sequence-specific DNA binding transcription factor activity | 1 2 3 4 5 6 |
GO:0005515 | IPI | Gene Ontology | protein binding | 1 |
GO:0097159 | IEA | PLAZA Homology | organic cyclic compound binding | HOM03M000014 |
GO:0003676 | IEA | PLAZA Homology | nucleic acid binding | HOM03M000014 |
GO:1901363 | IEA | PLAZA Homology | heterocyclic compound binding | HOM03M000014 |
GO:0005488 | IEA | PLAZA Homology | binding | HOM03M000014 |
GO:0001071 | IEA | PLAZA Homology | nucleic acid binding transcription factor activity | HOM03M000014 |
Cellular Component
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
Mapman id | Description |
---|---|
27.3.3 | RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family |
No SignalP domains detected for this gene.