Gene: AT1G18880 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT1G18880
- Transcript Identifier
- AT1G18880.1
- Gene Type
- Coding gene
- Location
- 1 : 6520800-6523241 : positive
Family
- Gene family
- Duplication type
- Block duplicate
Descriptions
- Description
-
Major facilitator superfamily protein
- Curated Summary
-
Encodes a low-affinity plasma membrane nitrate transporter expressed in the companion cells of root phloem.
Identifiers
Identifier | Name |
---|---|
alias | nitrate transporter 1.9 |
alias | NRT1.9 |
uniprot | Q9M9V7 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
- ...sequences.
- ...the multiple sequence alignment of the gene family with BioJS
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBIs protein database.
- ...the gene in Genomeview, a genome browser
- ...all colinear gene pairs.
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0006857 | ISS | Gene Ontology | oligopeptide transport | 1 |
GO:0010233 | IMP | Gene Ontology | phloem transport | 1 |
GO:0090408 | IMP | UniProt | phloem nitrate loading | 1 2 3 4 5 |
GO:0006826 | RCA | Gene Ontology | iron ion transport | 1 |
GO:0010106 | RCA | Gene Ontology | cellular response to iron ion starvation | 1 |
GO:0010167 | RCA | Gene Ontology | response to nitrate | 1 |
GO:0015706 | RCA | Gene Ontology | nitrate transport | 1 |
GO:0006810 | IEA | InterPro | transport | |
GO:0051234 | IEA | PLAZA Homology | establishment of localization | HOM03M000029 |
GO:0051179 | IEA | PLAZA Homology | localization | HOM03M000029 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005215 | ISS, IEA | Gene Ontology | transporter activity | 1 |
GO:0015112 | IDA | UniProt | nitrate transmembrane transporter activity | 1 2 3 4 5 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005886 | IDA, ISM, | UniProt | plasma membrane | 1 2 3 4 5 6 |
GO:0016020 | ISS, IEA | Gene Ontology | membrane | 1 |
GO:0016021 | IEA | UniProt | integral to membrane | 1 2 3 4 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
Mapman id | Description |
---|---|
34.13 | transport.peptides and oligopeptides |
No SignalP domains detected for this gene.