PLAZA 3.0 Monocots gene overview : AT1G15540

Gene: AT1G15540 (Arabidopsis thaliana)

Overview

Gene Identifier: AT1G15540
Transcript Identifier: AT1G15540.1
Gene Type: Coding gene
Location: 1 : 5342587-5343705 : positive

Family

Gene family: HOM03M000644
(105 genes in 13 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

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Identifiers

Identifier	Name

Toolbox

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...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0055114	IEA	InterPro	oxidation-reduction process

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0016706	IEA	InterPro	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0016491	IEA	InterPro	oxidoreductase activity

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005737	ISM	Gene Ontology	cytoplasm	1

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR005123	Oxoglutarate/iron-dependent dioxygenase
IPR026992	Non-haem dioxygenase N-terminal domain
IPR027443	Isopenicillin N synthase-like

Mapman id	Description
35.1	not assigned.no ontology

No SignalP domains detected for this gene.