PLAZA 3.0 Monocots gene overview : AT1G15520

Gene: AT1G15520 (Arabidopsis thaliana)

Overview

Gene Identifier: AT1G15520
Transcript Identifier: AT1G15520.1
Gene Type: Coding gene
Location: 1 : 5331993-5338175 : negative

Family

Gene family: HOM03M000040
(913 genes in 16 species)
specific family
Subfamily: ORTHO03M000036
(52 genes in 14 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description: pleiotropic drug resistance 12

Curated Summary: ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots.

Identifiers

Identifier	Name
alias	PDR12
alias	Arabidopsis thaliana ATP-binding cassette G40
alias	ABCG40
alias	ATABCG40
alias	ATP-binding cassette G40
alias	PLEIOTROPIC DRUG RESISTANCE 12
alias	ATPDR12
alias	pleiotropic drug resistance 12
uniprot	Q9M9E1

Toolbox

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...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0015692	IMP	UniProt	lead ion transport	1 2 3 4 5 6 7 8
GO:0006855	ISS	UniProt	drug transmembrane transport	1 2 3 4 5 6 7 8
GO:0009723	TAS, RCA	UniProt	response to ethylene	1 2 3 4 5 6 7 8 9
GO:0009751	TAS	UniProt	response to salicylic acid	1 2 3 4 5 6 7 8
GO:0009753	TAS, RCA	UniProt	response to jasmonic acid	1 2 3 4 5 6 7 8 9
GO:0010193	IEP	UniProt	response to ozone	1 2 3 4 5 6 7 8
GO:0046865	IDA	Gene Ontology	terpenoid transport	1
GO:0080168	IDA	UniProt	abscisic acid transport	1 2 3 4 5 6 7 8
GO:0000165	RCA	Gene Ontology	MAPK cascade	1
GO:0006612	RCA	Gene Ontology	protein targeting to membrane	1
GO:0007165	RCA	Gene Ontology	signal transduction	1
GO:0009414	RCA	Gene Ontology	response to water deprivation	1
GO:0009595	RCA	Gene Ontology	detection of biotic stimulus	1
GO:0009697	RCA	Gene Ontology	salicylic acid biosynthetic process	1
GO:0009733	RCA	Gene Ontology	response to auxin	1
GO:0009737	RCA	Gene Ontology	response to abscisic acid	1
GO:0009738	RCA	Gene Ontology	abscisic acid-activated signaling pathway	1
GO:0009862	RCA	Gene Ontology	systemic acquired resistance, salicylic acid mediated signaling pathway	1
GO:0009867	RCA	Gene Ontology	jasmonic acid mediated signaling pathway	1
GO:0010200	RCA	Gene Ontology	response to chitin	1
GO:0010310	RCA	Gene Ontology	regulation of hydrogen peroxide metabolic process	1
GO:0010363	RCA	Gene Ontology	regulation of plant-type hypersensitive response	1
GO:0031348	RCA	Gene Ontology	negative regulation of defense response	1
GO:0042538	RCA	Gene Ontology	hyperosmotic salinity response	1
GO:0042742	RCA	Gene Ontology	defense response to bacterium	1
GO:0043069	RCA	Gene Ontology	negative regulation of programmed cell death	1
GO:0043900	RCA	Gene Ontology	regulation of multi-organism process	1
GO:0050832	RCA	Gene Ontology	defense response to fungus	1
GO:0006200	IEA	UniProt	ATP catabolic process	1 2 3 4 5 6 7
GO:0006952	IEA	UniProt	defense response	1 2 3 4 5 6 7

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0042626	ISS	Gene Ontology	ATPase activity, coupled to transmembrane movement of substances	1
GO:0005524	IEA	UniProt	ATP binding	1 2 3 4 5 6 7
GO:0016887	IEA	UniProt	ATPase activity	1 2 3 4 5 6 7
GO:0017111	IEA	InterPro	nucleoside-triphosphatase activity
GO:0000166	IEA	InterPro	nucleotide binding
GO:0032555	IEA	PLAZA Homology	purine ribonucleotide binding	HOM03M000040
GO:0016817	IEA	PLAZA Homology	hydrolase activity, acting on acid anhydrides	HOM03M000040
GO:0032553	IEA	PLAZA Homology	ribonucleotide binding	HOM03M000040
GO:0043168	IEA	PLAZA Homology	anion binding	HOM03M000040
GO:0043167	IEA	PLAZA Homology	ion binding	HOM03M000040
GO:0035639	IEA	PLAZA Homology	purine ribonucleoside triphosphate binding	HOM03M000040
GO:0097367	IEA	PLAZA Homology	carbohydrate derivative binding	HOM03M000040
GO:0016818	IEA	PLAZA Homology	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	HOM03M000040
GO:0003824	IEA	PLAZA Homology	catalytic activity	HOM03M000040
GO:0032559	IEA	PLAZA Homology	adenyl ribonucleotide binding	HOM03M000040
GO:1901265	IEA	PLAZA Homology	nucleoside phosphate binding	HOM03M000040
GO:0016462	IEA	PLAZA Homology	pyrophosphatase activity	HOM03M000040
GO:0030554	IEA	PLAZA Homology	adenyl nucleotide binding	HOM03M000040
GO:0001882	IEA	PLAZA Homology	nucleoside binding	HOM03M000040
GO:0097159	IEA	PLAZA Homology	organic cyclic compound binding	HOM03M000040
GO:0017076	IEA	PLAZA Homology	purine nucleotide binding	HOM03M000040
GO:0036094	IEA	PLAZA Homology	small molecule binding	HOM03M000040
GO:0032549	IEA	PLAZA Homology	ribonucleoside binding	HOM03M000040
GO:0016787	IEA	PLAZA Homology	hydrolase activity	HOM03M000040
GO:1901363	IEA	PLAZA Homology	heterocyclic compound binding	HOM03M000040
GO:0001883	IEA	PLAZA Homology	purine nucleoside binding	HOM03M000040
GO:0032550	IEA	PLAZA Homology	purine ribonucleoside binding	HOM03M000040

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005886	IDA	UniProt	plasma membrane	1 2 3 4 5 6 7 8
GO:0016021	IEA	UniProt	integral to membrane	1 2 3 4 5 6 7
GO:0016020	IEA	InterPro	membrane

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR003593	AAA+ ATPase domain
IPR013525	ABC-2 type transporter
IPR003439	ABC transporter-like
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR013581	Plant PDR ABC transporter associated

Mapman id	Description
34.16	transport.ABC transporters and multidrug resistance systems

No SignalP domains detected for this gene.