Gene: AT1G15310 (Arabidopsis thaliana)

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Gene Identifier
AT1G15310
Transcript Identifier
AT1G15310.1
Gene Type
Coding gene
Location
1 : 5269173-5271947 : negative

Family

Gene family
HOM03M000871
(81 genes in 16 species)
specific family
Subfamily
ORTHO03M001833
(9 genes in 6 species)
specific family

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Descriptions

Description
signal recognition particle 54 kDa subunit
Curated Summary
54 kDa protein subunit of SRP that interacts with the signal peptide of secreted proteins
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Identifiers

Identifier Name
aliassignal recognition particle 54 kDa subunit
aliasSRP54-1
aliasSIGNAL RECOGNITION PARTICLE 54 KDA SUBUNIT
aliasATHSRP54A
uniprotP37106

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006617ISSGene OntologySRP-dependent cotranslational protein targeting to membrane, signal sequence recognition1
GO:0010267RCAGene Ontologyproduction of ta-siRNAs involved in RNA interference1
GO:0035196RCAGene Ontologyproduction of miRNAs involved in gene silencing by miRNA1
GO:0051607RCAGene Ontologydefense response to virus1
GO:0006184IEAUniProtGTP catabolic process1 2 3
GO:0006614IEAUniProtSRP-dependent cotranslational protein targeting to membrane1 2 3
GO:0006613IEAPLAZA Homologycotranslational protein targeting to membraneHOM03M000871

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003729ISSGene OntologymRNA binding1
GO:0005525IEA, ISSUniProtGTP binding1 2 3 4
GO:0008312IEA, ISSUniProt7S RNA binding1 2 3 4
GO:0003924IEAUniProtGTPase activity1 2 3
GO:0017111IEAInterPronucleoside-triphosphatase activity
GO:0000166IEAInterPronucleotide binding
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G49500

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737ISM, ISSGene Ontologycytoplasm1 2
GO:0005786ISSUniProtsignal recognition particle, endoplasmic reticulum targeting1 2 3 4
GO:0048500IEAInterProsignal recognition particle
GO:0005829ISOPLAZA Integrative OrthologycytosolAT1G48900

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013822Signal recognition particle, SRP54 subunit, helical bundle
IPR004125Signal recognition particle, SRP54 subunit, M-domain
IPR022941Signal recognition particle, SRP54 subunit
IPR000897Signal recognition particle, SRP54 subunit, GTPase domain
IPR003593AAA+ ATPase domain
IPR006325Signal recognition particle, SRP54 subunit, eukaryotic
IPR027417P-loop containing nucleoside triphosphate hydrolase

Mapman id Description
29.3protein.targeting
No SignalP domains detected for this gene.