PLAZA 3.0 Monocots gene overview : AT1G14400

Gene: AT1G14400 (Arabidopsis thaliana)

Overview

Gene Identifier: AT1G14400
Transcript Identifier: AT1G14400.1
Gene Type: Coding gene
Location: 1 : 4927294-4928136 : negative

Family

Gene family: HOM03M000077
(598 genes in 16 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description: ubiquitin carrier protein 1

Curated Summary: ubiquitin carrier protein

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Identifiers

Identifier	Name
alias	ubiquitin carrier protein 1
alias	ATUBC1
alias	UBC1
alias	UBIQUITIN CONJUGATING ENZYME 1
uniprot	P25865

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006511	IDA, RCATAS,	UniProt	ubiquitin-dependent protein catabolic process	1 2 3 4 5 6 7 8 9 10 11 12
GO:0009910	IGI	UniProt	negative regulation of flower development	1 2 3 4 5 6 7 8 9 10
GO:0009965	IGI	UniProt	leaf morphogenesis	1 2 3 4 5 6 7 8 9 10
GO:0010228	IGI, RCA,	UniProt	vegetative to reproductive phase transition of meristem	1 2 3 4 5 6 7 8 9 10 11
GO:0033523	IGI	UniProt	histone H2B ubiquitination	1 2 3 4 5 6 7 8 9 10
GO:0006301	RCA	Gene Ontology	postreplication repair	1
GO:0006605	RCA	Gene Ontology	protein targeting	1
GO:0006623	RCA	Gene Ontology	protein targeting to vacuole	1
GO:0006661	RCA	Gene Ontology	phosphatidylinositol biosynthetic process	1
GO:0016197	RCA	Gene Ontology	endosomal transport	1

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004842	IDA, ISS,	UniProt	ubiquitin-protein ligase activity	1 2 3 4 5 6 7 8 9 10 11
GO:0005524	IEA	UniProt	ATP binding	1 2 3 4 5 6 7 8 9
GO:0016881	IEA	InterPro	acid-amino acid ligase activity
GO:0016874	IEA	PLAZA Homology	ligase activity	HOM03M000077
GO:0016879	IEA	PLAZA Homology	ligase activity, forming carbon-nitrogen bonds	HOM03M000077
GO:0003824	IEA	PLAZA Homology	catalytic activity	HOM03M000077

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	ISM	Gene Ontology	nucleus	1

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR016135	Ubiquitin-conjugating enzyme/RWD-like
IPR000608	Ubiquitin-conjugating enzyme, E2
IPR023313	Ubiquitin-conjugating enzyme, active site

Mapman id	Description
29.5.11.3	protein.degradation.ubiquitin.E2

No SignalP domains detected for this gene.