Gene: AT1G12980 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G12980
Transcript Identifier
AT1G12980.1
Gene Type
Coding gene
Location
1 : 4429791-4430777 : positive

Family

Gene family
HOM03M000014
(1785 genes in 16 species)
specific family
Duplication type
Tandem duplicate

Loading...please wait

Descriptions

Description
Integrase-type DNA-binding superfamily protein
Curated Summary
Encodes an AP2/ERF protein, is expressed in a subdomain of meristem stem cells, in lateral organ anlagen, and transiently in the distal domain of organ primordia. It is a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ESR1). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. Can confer cytokinin-independent shoot formation and causes severe meristem defects when overexpressed in Arabidopsis root explants. Involved in controlling embryogenesis and embryo patterning by interaction with PHAVOLUTA.
Show more...

Identifiers

Identifier Name
aliasDRN
aliasDORNROSCHEN
aliasESR1
aliasENHANCER OF SHOOT REGENERATION 1
uniprotQ9SAD4

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355ISS, IEAGene Ontologyregulation of transcription, DNA-dependent1
GO:0009735IEPUniProtresponse to cytokinin1 2 3 4 5 6
GO:0009887IMPGene Ontologyorgan morphogenesis1
GO:0010084IMPUniProtspecification of organ axis polarity1 2 3 4 5 6
GO:0009880IMPUniProtembryonic pattern specification1 2 3 4 5 6
GO:0048825IMPUniProtcotyledon development1 2 3 4 5 6
GO:0009734IEAUniProtauxin mediated signaling pathway1 2 3 4 5
GO:0009736IEAUniProtcytokinin-activated signaling pathway1 2 3 4 5
GO:0009873IEAUniProtethylene mediated signaling pathway1 2 3 4 5
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4 5
GO:0010468IEAPLAZA Homologyregulation of gene expressionHOM03M000014
GO:0006807IEAPLAZA Homologynitrogen compound metabolic processHOM03M000014
GO:0010467IEAPLAZA Homologygene expressionHOM03M000014
GO:0051252IEAPLAZA Homologyregulation of RNA metabolic processHOM03M000014
GO:0051171IEAPLAZA Homologyregulation of nitrogen compound metabolic processHOM03M000014
GO:0044260IEAPLAZA Homologycellular macromolecule metabolic processHOM03M000014
GO:0019222IEAPLAZA Homologyregulation of metabolic processHOM03M000014
GO:0019219IEAPLAZA Homologyregulation of nucleobase-containing compound metabolic processHOM03M000014
GO:0034641IEAPLAZA Homologycellular nitrogen compound metabolic processHOM03M000014
GO:0034645IEAPLAZA Homologycellular macromolecule biosynthetic processHOM03M000014
GO:0050789IEAPLAZA Homologyregulation of biological processHOM03M000014
GO:0009889IEAPLAZA Homologyregulation of biosynthetic processHOM03M000014
GO:0018130IEAPLAZA Homologyheterocycle biosynthetic processHOM03M000014
GO:0019438IEAPLAZA Homologyaromatic compound biosynthetic processHOM03M000014
GO:0043170IEAPLAZA Homologymacromolecule metabolic processHOM03M000014
GO:0046483IEAPLAZA Homologyheterocycle metabolic processHOM03M000014
GO:0016070IEAPLAZA HomologyRNA metabolic processHOM03M000014
GO:0009987IEAPLAZA Homologycellular processHOM03M000014
GO:0044271IEAPLAZA Homologycellular nitrogen compound biosynthetic processHOM03M000014
GO:0065007IEAPLAZA Homologybiological regulationHOM03M000014
GO:0010556IEAPLAZA Homologyregulation of macromolecule biosynthetic processHOM03M000014
GO:0006139IEAPLAZA Homologynucleobase-containing compound metabolic processHOM03M000014
GO:0032774IEAPLAZA HomologyRNA biosynthetic processHOM03M000014
GO:0006725IEAPLAZA Homologycellular aromatic compound metabolic processHOM03M000014
GO:1901576IEAPLAZA Homologyorganic substance biosynthetic processHOM03M000014
GO:0090304IEAPLAZA Homologynucleic acid metabolic processHOM03M000014
GO:0080090IEAPLAZA Homologyregulation of primary metabolic processHOM03M000014
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000014
GO:0044237IEAPLAZA Homologycellular metabolic processHOM03M000014
GO:0044238IEAPLAZA Homologyprimary metabolic processHOM03M000014
GO:0009058IEAPLAZA Homologybiosynthetic processHOM03M000014
GO:0009059IEAPLAZA Homologymacromolecule biosynthetic processHOM03M000014
GO:2000112IEAPLAZA Homologyregulation of cellular macromolecule biosynthetic processHOM03M000014
GO:0060255IEAPLAZA Homologyregulation of macromolecule metabolic processHOM03M000014
GO:0031323IEAPLAZA Homologyregulation of cellular metabolic processHOM03M000014
GO:0031326IEAPLAZA Homologyregulation of cellular biosynthetic processHOM03M000014
GO:1901360IEAPLAZA Homologyorganic cyclic compound metabolic processHOM03M000014
GO:1901362IEAPLAZA Homologyorganic cyclic compound biosynthetic processHOM03M000014
GO:0034654IEAPLAZA Homologynucleobase-containing compound biosynthetic processHOM03M000014
GO:0050794IEAPLAZA Homologyregulation of cellular processHOM03M000014
GO:0008152IEAPLAZA Homologymetabolic processHOM03M000014
GO:0071704IEAPLAZA Homologyorganic substance metabolic processHOM03M000014
GO:0044249IEAPLAZA Homologycellular biosynthetic processHOM03M000014

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEA, ISSUniProtDNA binding1 2 3 4 5 6
GO:0003700ISS, IEA, UniProtsequence-specific DNA binding transcription factor activity1 2 3 4 5 6
GO:0005515IPIGene Ontologyprotein binding1
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03M000014
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03M000014
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03M000014
GO:0005488IEAPLAZA HomologybindingHOM03M000014
GO:0001071IEAPLAZA Homologynucleic acid binding transcription factor activityHOM03M000014

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISMISS, UniProtnucleus1 2 3 4 5 6 7 8
GO:0005829IDAUniProtcytosol1 2 3 4 5 6

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001471AP2/ERF domain
IPR016177DNA-binding domain

Mapman id Description
27.3.3RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBAP2-EREBP
PlantTFDBERF