Gene: AT1G12860 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G12860
Transcript Identifier
AT1G12860.1
Gene Type
Coding gene
Location
1 : 4384758-4386392 : positive

Family

Gene family
HOM03M000348
(169 genes in 14 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Curated Summary
Encodes ICE2 (Inducer of CBF Expression 2), a transcription factor of the bHLH family that participates in the response to deep freezing through the cold acclimation-dependent pathway. Overexpression of ICE2 results in increased tolerance to deep freezing stress after cold acclimation.
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Identifiers

Identifier Name
aliasSCREAM 2
aliasINDUCER OF CBF EXPRESSION 2
aliasICE2
aliasSCRM2
uniprotQ9LPW3

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEA, TASUniProtregulation of transcription, DNA-dependent1 2 3 4 5 6 7
GO:0010444IMPGene Ontologyguard mother cell differentiation1
GO:0050826IMPGene Ontologyresponse to freezing1
GO:0010103RCAGene Ontologystomatal complex morphogenesis1
GO:0016556RCAGene OntologymRNA modification1
GO:0007275IEAUniProtmulticellular organismal development1 2 3 4 5 6
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4 5 6

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEA, ISSUniProtDNA binding1 2 3 4 5 6 7
GO:0003700ISSGene Ontologysequence-specific DNA binding transcription factor activity1
GO:0046983IEAInterProprotein dimerization activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, ISMUniProtnucleus1 2 3 4 5 6 7

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain

Mapman id Description
27.3.6RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBbHLH
PlantTFDBbHLH