Gene: AT1G12040 (Arabidopsis thaliana)

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Gene Identifier
AT1G12040
Transcript Identifier
AT1G12040.1
Gene Type
Coding gene
Location
1 : 4070160-4072394 : positive

Family

Gene family
HOM03M000235
(216 genes in 14 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
leucine-rich repeat/extensin 1
Curated Summary
encodes a a chimeric leucine-rich repeat/extensin protein that regulates root hair morphogenesis and elongation. Null mutants develop root hairs that frequently abort, swell, or branch. Gene is expressed in root hair cells and protein is specifically localized in the wall of the hair proper.
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Identifiers

Identifier Name
aliasleucine-rich repeat/extensin 1
aliasLRX1
uniprotO65375

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000904IMPUniProtcell morphogenesis involved in differentiation1 2 3 4 5
GO:0009826IMPUniProtunidimensional cell growth1 2 3 4 5
GO:0010054IMP, RCA, UniProttrichoblast differentiation1 2 3 4 5 6
GO:0048527RCAGene Ontologylateral root development1
GO:0048589RCAGene Ontologydevelopmental growth1
GO:0048765RCAGene Ontologyroot hair cell differentiation1
GO:0048767RCAGene Ontologyroot hair elongation1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0009927NASGene Ontologyhistidine phosphotransfer kinase activity1
GO:0005199ISSUniProtstructural constituent of cell wall1 2 3 4 5
GO:0005515IEAInterProprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009505IDAUniProtplant-type cell wall1 2 3 4 5
GO:0009506IDAUniProtplasmodesma1 2 3 4 5
GO:0005576IEAUniProtextracellular region1 2 3 4

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013210Leucine-rich repeat-containing N-terminal, type 2
IPR001611Leucine-rich repeat

Mapman id Description
10.5.3cell wall.cell wall proteins.LRR
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network