Gene: AT1G11190 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G11190
Transcript Identifier
AT1G11190.1
Gene Type
Coding gene
Location
1 : 3750338-3752696 : negative

Family

Gene family
HOM03M001369
(55 genes in 14 species)
specific family
Subfamily
ORTHO03M008281
(5 genes in 5 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
bifunctional nuclease i
Curated Summary
Encodes a bifunctional nuclease that acts on both RNA and DNA involved in nucleic acid degradation to facilitate nucleotide and phosphate recovery during senescence. It has mismatch-specific endonuclease activity with wide recognition of single base mismatches as well as the ability to cleave indel types of mismatches (heteroduplexes with loops).
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Identifiers

Identifier Name
aliasENDO1
aliasbifunctional nuclease i
aliasENDONUCLEASE 1
aliasBFN1
uniprotQ9SXA6

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006308IEA, ISSUniProtDNA catabolic process1 2 3 4 5 6 7
GO:0010150IEPUniProtleaf senescence1 2 3 4 5 6 7
GO:0080187IEPUniProtfloral organ senescence1 2 3 4 5 6 7

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676IEA, ISSUniProtnucleic acid binding1 2 3 4 5 6 7
GO:0000014IDAUniProtsingle-stranded DNA endodeoxyribonuclease activity1 2 3 4 5 6 7
GO:0016891IDAUniProtendoribonuclease activity, producing 5'-phosphomonoesters1 2 3 4 5 6 7
GO:0043765IDAUniProtT/G mismatch-specific endonuclease activity1 2 3 4 5 6 7
GO:0046872IEAUniProtmetal ion binding1 2 3 4 5 6
GO:0004519IEAInterProendonuclease activity
GO:0016788IEAInterProhydrolase activity, acting on ester bonds

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005576ISMGene Ontologyextracellular region1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR008947Phospholipase C/P1 nuclease domain
IPR003154S1/P1 nuclease

Mapman id Description
28.1DNA.synthesis/chromatin structure
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network