PLAZA 3.0 Monocots gene overview : AT1G10130

Gene: AT1G10130 (Arabidopsis thaliana)

Overview

Gene Identifier: AT1G10130
Transcript Identifier: AT1G10130.1
Gene Type: Coding gene
Location: 1 : 3311139-3321941 : positive

Family

Gene family: HOM03M000149
(320 genes in 16 species)
specific family

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Descriptions

Description: endoplasmic reticulum-type calcium-transporting ATPase 3

Curated Summary: Encodes a golgi localized P2A-type Ca2+ ATPase involved in Mn nutrition and homeostasis.

Identifiers

Identifier	Name
alias	ATECA3
alias	endoplasmic reticulum-type calcium-transporting ATPase 3
alias	ARABIDOPSIS THALIANA ER-TYPE CA2+-ATPASE 3
alias	ECA3
uniprot	Q9SY55

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006816	ISS, IEA	Gene Ontology	calcium ion transport	1
GO:0006828	IGI	Gene Ontology	manganese ion transport	1
GO:0055071	IMP	UniProt	manganese ion homeostasis	1 2 3 4 5
GO:0048364	IMP	UniProt	root development	1 2 3 4 5
GO:0006891	RCA	Gene Ontology	intra-Golgi vesicle-mediated transport	1
GO:0006812	IEA	InterPro	cation transport
GO:0070838	IEA	PLAZA Homology	divalent metal ion transport	HOM03M000149
GO:0070588	IEA	PLAZA Homology	calcium ion transmembrane transport	HOM03M000149
GO:0044765	IEA	PLAZA Homology	single-organism transport	HOM03M000149
GO:0072511	IEA	PLAZA Homology	divalent inorganic cation transport	HOM03M000149
GO:0006811	IEA	PLAZA Homology	ion transport	HOM03M000149

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005388	IMP, ISSIEA,	UniProt	calcium-transporting ATPase activity	1 2 3 4 5 6
GO:0005516	ISS	Gene Ontology	calmodulin binding	1
GO:0015410	IMP	UniProt	manganese-transporting ATPase activity	1 2 3 4 5
GO:0005524	IEA	UniProt	ATP binding	1 2 3 4
GO:0046872	IEA	UniProt	metal ion binding	1 2 3 4
GO:0019829	IEA	InterPro	cation-transporting ATPase activity
GO:0000166	IEA	InterPro	nucleotide binding
GO:0005215	IEA	PLAZA Homology	transporter activity	HOM03M000149
GO:0016817	IEA	PLAZA Homology	hydrolase activity, acting on acid anhydrides	HOM03M000149
GO:0015075	IEA	PLAZA Homology	ion transmembrane transporter activity	HOM03M000149
GO:0008324	IEA	PLAZA Homology	cation transmembrane transporter activity	HOM03M000149
GO:0016818	IEA	PLAZA Homology	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	HOM03M000149
GO:0015662	IEA	PLAZA Homology	ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	HOM03M000149
GO:0022891	IEA	PLAZA Homology	substrate-specific transmembrane transporter activity	HOM03M000149
GO:0022892	IEA	PLAZA Homology	substrate-specific transporter activity	HOM03M000149
GO:0016820	IEA	PLAZA Homology	hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	HOM03M000149
GO:0015399	IEA	PLAZA Homology	primary active transmembrane transporter activity	HOM03M000149
GO:0015405	IEA	PLAZA Homology	P-P-bond-hydrolysis-driven transmembrane transporter activity	HOM03M000149
GO:0072509	IEA	PLAZA Homology	divalent inorganic cation transmembrane transporter activity	HOM03M000149
GO:0015085	IEA	PLAZA Homology	calcium ion transmembrane transporter activity	HOM03M000149
GO:0046873	IEA	PLAZA Homology	metal ion transmembrane transporter activity	HOM03M000149
GO:0043492	IEA	PLAZA Homology	ATPase activity, coupled to movement of substances	HOM03M000149
GO:0042623	IEA	PLAZA Homology	ATPase activity, coupled	HOM03M000149
GO:0042626	IEA	PLAZA Homology	ATPase activity, coupled to transmembrane movement of substances	HOM03M000149
GO:0042625	IEA	PLAZA Homology	ATPase activity, coupled to transmembrane movement of ions	HOM03M000149
GO:0022804	IEA	PLAZA Homology	active transmembrane transporter activity	HOM03M000149
GO:1901265	IEA	PLAZA Homology	nucleoside phosphate binding	HOM03M000149
GO:0016462	IEA	PLAZA Homology	pyrophosphatase activity	HOM03M000149
GO:0016887	IEA	PLAZA Homology	ATPase activity	HOM03M000149
GO:0017111	IEA	PLAZA Homology	nucleoside-triphosphatase activity	HOM03M000149
GO:0022857	IEA	PLAZA Homology	transmembrane transporter activity	HOM03M000149

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	ISM	Gene Ontology	nucleus	1
GO:0005794	IDA	UniProt	Golgi apparatus	1 2 3 4 5
GO:0012505	IDA	UniProt	endomembrane system	1 2 3 4 5
GO:0005768	IDA	UniProt	endosome	1 2 3 4 5
GO:0005802	IDA	UniProt	trans-Golgi network	1 2 3 4 5
GO:0016021	IEA	UniProt	integral to membrane	1 2 3 4
GO:0031902	IEA	UniProt	late endosome membrane	1 2 3 4
GO:0031224	IEA	PLAZA Homology	intrinsic to membrane	HOM03M000149

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR001757	Cation-transporting P-type ATPase
IPR008250	P-type ATPase, A domain
IPR023214	HAD-like domain
IPR018303	P-type ATPase, phosphorylation site
IPR005782	Calcium-transporting P-type ATPase, subfamily IIA, SERCA-type
IPR023298	P-type ATPase, transmembrane domain
IPR006068	Cation-transporting P-type ATPase, C-terminal
IPR023299	P-type ATPase, cytoplasmic domain N
IPR004014	Cation-transporting P-type ATPase, N-terminal

Mapman id	Description
34.21	transport.calcium

No SignalP domains detected for this gene.