Gene: AT1G09890 (Arabidopsis thaliana)

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Gene Identifier
AT1G09890
Transcript Identifier
AT1G09890.1
Gene Type
Coding gene
Location
1 : 3214237-3217386 : negative

Family

Gene family
HOM03M000820
(84 genes in 14 species)
specific family
Subfamily
ORTHO03M000154
(24 genes in 10 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description
Rhamnogalacturonate lyase family protein
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Identifiers

Identifier Name

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0005975IEAInterProcarbohydrate metabolic process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016829ISSGene Ontologylyase activity1
GO:0030246IEAInterProcarbohydrate binding
GO:0003824IEAInterProcatalytic activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005576ISMGene Ontologyextracellular region1

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR008979Galactose-binding domain-like
IPR010325Rhamnogalacturonate lyase
IPR014766Carboxypeptidase, regulatory domain
IPR011013Galactose mutarotase-like domain
IPR013784Carbohydrate-binding-like fold

Mapman id Description
10.6.3cell wall.degradation.pectate lyases and polygalacturonases
No SignalP domains detected for this gene.