Gene: AT1G09700 (Arabidopsis thaliana)

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Gene Identifier
AT1G09700
Transcript Identifier
AT1G09700.1
Gene Type
Coding gene
Location
1 : 3137960-3140118 : negative

Family

Gene family
HOM03M000640
(107 genes in 15 species)
specific family

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Descriptions

Description
dsRNA-binding domain-like superfamily protein
Curated Summary
Encodes a nuclear dsRNA binding protein. Involved in mRNA cleavage. The mutant is characterized by shorter stature, delayed flowering, leaf hyponasty, reduced fertility, decreased rate of root growth, and an altered root gravitropic response. It also exhibits less sensitivity to auxin and cytokinin.
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Identifiers

Identifier Name
aliasDRB1
aliasDSRNA-BINDING PROTEIN 1
aliasHYL1
aliasHYPONASTIC LEAVES 1
uniprotO04492

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009733IMPUniProtresponse to auxin1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17
GO:0009735IMPUniProtresponse to cytokinin1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17
GO:0009737IMPUniProtresponse to abscisic acid1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17
GO:0035196IMP, RCAGene Ontologyproduction of miRNAs involved in gene silencing by miRNA1 2
GO:0035279IMPUniProtmRNA cleavage involved in gene silencing by miRNA1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17
GO:0031054IMPUniProtpre-miRNA processing1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17
GO:0010267IMP, RCA, UniProtproduction of ta-siRNAs involved in RNA interference1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18
GO:0051607RCAGene Ontologydefense response to virus1
GO:0010305IMPUniProtleaf vascular tissue pattern formation1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17
GO:0010589IMPUniProtleaf proximal/distal pattern formation1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17
GO:0016075IEAUniProtrRNA catabolic process1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003725IDAUniProtdouble-stranded RNA binding1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17
GO:0005515IPIGene Ontologyprotein binding1
GO:0035198IDAUniProtmiRNA binding1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17
GO:0004525IEAUniProtribonuclease III activity1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16
GO:0003723IEAInterProRNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737ISMGene Ontologycytoplasm1
GO:0005634IDAGene Ontologynucleus1
GO:0015030IDAGene OntologyCajal body1
GO:0010445IDAUniProtnuclear dicing body1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17
GO:0005622IEAPLAZA HomologyintracellularHOM03M000640

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR014720Double-stranded RNA-binding domain
IPR011907Ribonuclease III

Mapman id Description
27.4RNA.RNA binding
No SignalP domains detected for this gene.