Gene: AT1G05830 (Arabidopsis thaliana)

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Gene Identifier
AT1G05830
Transcript Identifier
AT1G05830.1
Gene Type
Coding gene
Location
1 : 1754452-1761225 : positive

Family

Gene family
HOM03M000312
(180 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
trithorax-like protein 2
Curated Summary
Encodes a homolog of trithorax, a histone-lysine N-methyltransferase. Paralog of ATX1. Unlike ATX1 which is involved in trimethylating of histone H3-mysine 4, ATX2 is involved in dimethylating of histone H3-lysine 4. ATX1 and ATX2 influence the expression of largely nonoverlapping gene sets. The expression pattern of ATX2 is also different from that of ATX1.
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Identifiers

Identifier Name
aliasSDG30
aliasSET DOMAIN PROTEIN 30
aliastrithorax-like protein 2
aliasATX2
uniprotP0CB22

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IMP, ISS, UniProtregulation of transcription, DNA-dependent1 2 3 4 5
GO:0051568IMPGene Ontologyhistone H3-K4 methylation1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677ISSGene OntologyDNA binding1
GO:0042800IMPUniProthistone methyltransferase activity (H3-K4 specific)1 2 3 4
GO:0008270IEAUniProtzinc ion binding1 2 3
GO:0005515IEAInterProprotein binding
GO:0043167IEAPLAZA Homologyion bindingHOM03M000312

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, ISMUniProtnucleus1 2 3 4

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001214SET domain
IPR003888FY-rich, N-terminal
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR000313PWWP domain
IPR003889FY-rich, C-terminal
IPR019786Zinc finger, PHD-type, conserved site
IPR019787Zinc finger, PHD-finger
IPR011011Zinc finger, FYVE/PHD-type
IPR001965Zinc finger, PHD-type
IPR003616Post-SET domain

Mapman id Description
27.3.69RNA.regulation of transcription.SET-domain transcriptional regulator family
No SignalP domains detected for this gene.