PLAZA 3.0 Monocots gene overview : AT1G05580

Gene: AT1G05580 (Arabidopsis thaliana)

Overview

Gene Identifier: AT1G05580
Transcript Identifier: AT1G05580.1
Gene Type: Coding gene
Location: 1 : 1665594-1668794 : negative

Family

Gene family: HOM03M000180
(273 genes in 14 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description: cation/H+ exchanger 23

Curated Summary: member of Putative Na+/H+ antiporter family

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Identifiers

Identifier	Name
alias	CHX23
alias	ATCHX23
alias	cation/H+ exchanger 23
uniprot	Q8VYD4

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0035725	ISS	Gene Ontology	sodium ion transmembrane transport	1
GO:0006812	IC, IEA	Gene Ontology	cation transport	1
GO:0010183	IGI	UniProt	pollen tube guidance	1 2 3 4 5 6 7 8
GO:0071805	IDA	UniProt	potassium ion transmembrane transport	1 2 3 4 5 6 7 8
GO:0055085	IEA	InterPro	transmembrane transport
GO:0044765	IEA	PLAZA Homology	single-organism transport	HOM03M000180
GO:0006811	IEA	PLAZA Homology	ion transport	HOM03M000180

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0015385	ISS	Gene Ontology	sodium:hydrogen antiporter activity	1
GO:0005451	NAS	Gene Ontology	monovalent cation:hydrogen antiporter activity	1
GO:0015299	IEA	UniProt	solute:hydrogen antiporter activity	1 2 3 4 5 6 7
GO:0005215	IEA	PLAZA Homology	transporter activity	HOM03M000180
GO:0015075	IEA	PLAZA Homology	ion transmembrane transporter activity	HOM03M000180
GO:0015078	IEA	PLAZA Homology	hydrogen ion transmembrane transporter activity	HOM03M000180
GO:0008324	IEA	PLAZA Homology	cation transmembrane transporter activity	HOM03M000180
GO:0015077	IEA	PLAZA Homology	monovalent inorganic cation transmembrane transporter activity	HOM03M000180
GO:0022804	IEA	PLAZA Homology	active transmembrane transporter activity	HOM03M000180
GO:0015298	IEA	PLAZA Homology	solute:cation antiporter activity	HOM03M000180
GO:0015297	IEA	PLAZA Homology	antiporter activity	HOM03M000180
GO:0022890	IEA	PLAZA Homology	inorganic cation transmembrane transporter activity	HOM03M000180
GO:0022891	IEA	PLAZA Homology	substrate-specific transmembrane transporter activity	HOM03M000180
GO:0022892	IEA	PLAZA Homology	substrate-specific transporter activity	HOM03M000180
GO:0015291	IEA	PLAZA Homology	secondary active transmembrane transporter activity	HOM03M000180
GO:0022857	IEA	PLAZA Homology	transmembrane transporter activity	HOM03M000180

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005886	ISM	Gene Ontology	plasma membrane	1
GO:0005783	IDA	UniProt	endoplasmic reticulum	1 2 3 4 5 6 7 8
GO:0031969	IEA	UniProt	chloroplast membrane	1 2 3 4 5 6 7
GO:0005789	IEA	UniProt	endoplasmic reticulum membrane	1 2 3 4 5 6 7
GO:0016021	IEA	UniProt	integral to membrane	1 2 3 4 5 6 7
GO:0031224	IEA	PLAZA Homology	intrinsic to membrane	HOM03M000180

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR006153	Cation/H+ exchanger

Mapman id	Description
34.12	transport.metal

No SignalP domains detected for this gene.