Gene: AT1G04950 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G04950
Transcript Identifier
AT1G04950.1
Gene Type
Coding gene
Location
1 : 1403606-1407184 : negative

Family

Gene family
HOM03M003489
(26 genes in 16 species)
specific family
Subfamily
ORTHO03M015687
(3 genes in 3 species)
specific family

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Descriptions

Description
TATA BOX ASSOCIATED FACTOR II 59
Curated Summary
Encodes one of two Arabidopsis proteins with significant similarity to the histone fold TBP-associated factor TAF6. Mutants are embryo lethal and transmission of the mutant allele through the male gametophyte is significantly reduced. This is due to reduced pollen tube growth of the mutant.
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Identifiers

Identifier Name
aliasTAF6
aliasEMBRYO DEFECTIVE 2781
aliasATTAF6
aliasTAFII59
aliasTATA BOX ASSOCIATED FACTOR II 59
aliasTBP-associated factor 6
aliasEMB2781
uniprotQ9MAU3

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006352IEA, ISSUniProtDNA-dependent transcription, initiation1 2 3 4 5 6 7
GO:0009860IMPUniProtpollen tube growth1 2 3 4 5 6 7
GO:0000394RCAGene OntologyRNA splicing, via endonucleolytic cleavage and ligation1
GO:0006366RCAGene Ontologytranscription from RNA polymerase II promoter1
GO:0010048RCAGene Ontologyvernalization response1
GO:0048573RCAGene Ontologyphotoperiodism, flowering1
GO:0051090IEAUniProtregulation of sequence-specific DNA binding transcription factor activity1 2 3 4 5 6

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046982IEAInterProprotein heterodimerization activity
GO:0005488IEAInterProbinding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, ISM, ISSUniProtnucleus1 2 3 4 5 6 7 8

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011989Armadillo-like helical
IPR009072Histone-fold
IPR016024Armadillo-type fold
IPR011442Domain of unknown function DUF1546
IPR004823TATA box binding protein associated factor (TAF)

Mapman id Description
27.3.67RNA.regulation of transcription.putative transcription regulator
No SignalP domains detected for this gene.