PLAZA 3.0 Monocots gene overview : AT1G04810

Gene: AT1G04810 (Arabidopsis thaliana)

Overview

Gene Identifier: AT1G04810
Transcript Identifier: AT1G04810.1
Gene Type: Coding gene
Location: 1 : 1350304-1355261 : positive

Family

Gene family: HOM03M002086
(40 genes in 16 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit

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Identifiers

Identifier	Name
uniprot	Q9MAT0

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006511	TAS	Gene Ontology	ubiquitin-dependent protein catabolic process	1
GO:0030163	TAS	UniProt	protein catabolic process	1 2 3 4 5
GO:0006094	RCA	Gene Ontology	gluconeogenesis	1
GO:0006302	RCA	Gene Ontology	double-strand break repair	1
GO:0006635	RCA	Gene Ontology	fatty acid beta-oxidation	1
GO:0007010	RCA	Gene Ontology	cytoskeleton organization	1
GO:0009407	RCA	Gene Ontology	toxin catabolic process	1
GO:0010332	RCA	Gene Ontology	response to gamma radiation	1
GO:0010498	RCA	Gene Ontology	proteasomal protein catabolic process	1
GO:0043161	RCA	Gene Ontology	proteasome-mediated ubiquitin-dependent protein catabolic process	1
GO:0043248	RCA	Gene Ontology	proteasome assembly	1
GO:0051788	RCA	Gene Ontology	response to misfolded protein	1
GO:0080129	RCA	Gene Ontology	proteasome core complex assembly	1
GO:0050790	IEA	UniProt	regulation of catalytic activity	1 2 3 4
GO:0042176	IEA	UniProt	regulation of protein catabolic process	1 2 3 4

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0030234	IEA	UniProt	enzyme regulator activity	1 2 3 4
GO:0005488	IEA	InterPro	binding

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0008540	ISS, TAS	Gene Ontology	proteasome regulatory particle, base subcomplex	1 2
GO:0009507	ISM	Gene Ontology	chloroplast	1
GO:0005634	TAS	UniProt	nucleus	1 2 3 4 5
GO:0005886	IDA	UniProt	plasma membrane	1 2 3 4 5
GO:0000502	IDA	UniProt	proteasome complex	1 2 3 4 5
GO:0005829	IDA	UniProt	cytosol	1 2 3 4 5

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR016024	Armadillo-type fold
IPR002015	Proteasome/cyclosome repeat
IPR011989	Armadillo-like helical

Mapman id	Description
29.5.11.20	protein.degradation.ubiquitin.proteasom

No SignalP domains detected for this gene.