Gene: AT1G04050 (Arabidopsis thaliana)

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Gene Identifier
AT1G04050
Transcript Identifier
AT1G04050.1
Gene Type
Coding gene
Location
1 : 1045967-1049196 : negative

Family

Gene family
HOM03M001722
(45 genes in 14 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
homolog of SU(var)3-9 1
Curated Summary
Encodes SUVR1, one of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain. Localized to the nucleolus, maybe involved in regulation of rRNA expression.
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Identifiers

Identifier Name
aliashomolog of SU(var)3-9 1
aliasSUVR1
aliasSET DOMAIN PROTEIN 13
aliasSDG13
uniprotQ946J2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009855RCAGene Ontologydetermination of bilateral symmetry1
GO:0009887RCAGene Ontologyorgan morphogenesis1
GO:0010051RCAGene Ontologyxylem and phloem pattern formation1
GO:0048439RCAGene Ontologyflower morphogenesis1
GO:0048451RCAGene Ontologypetal formation1
GO:0048453RCAGene Ontologysepal formation1
GO:0048519RCAGene Ontologynegative regulation of biological process1
GO:0034968IEAInterProhistone lysine methylation

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0018024IEAUniProthistone-lysine N-methyltransferase activity1 2
GO:0008270IEAUniProtzinc ion binding1 2
GO:0005515IEAInterProprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISM, IEAGene Ontologynucleus1
GO:0005730IDAUniProtnucleolus1 2 3
GO:0005694IEAUniProtchromosome1 2

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR007728Pre-SET domain
IPR003606Pre-SET zinc-binding sub-group
IPR025776Histone-lysine N-methyltransferase SUVR1/2/4
IPR001214SET domain
IPR018848WIYLD domain

Mapman id Description
27.3.69RNA.regulation of transcription.SET-domain transcriptional regulator family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBSET