Gene: AT1G03680 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT1G03680
- Transcript Identifier
- AT1G03680.1
- Gene Type
- Coding gene
- Location
- 1 : 916990-917865 : negative
Family
- Gene family
- Subfamily
- Duplication type
- Block duplicate
Descriptions
- Description
-
thioredoxin M-type 1
- Curated Summary
-
encodes a chloroplast thioredoxin similar to prokaryotic thioredoxins.
Identifiers
Identifier | Name |
---|---|
alias | TRX-M1 |
alias | THM1 |
alias | ATHM1 |
alias | thioredoxin M-type 1 |
alias | THIOREDOXIN M-TYPE 1 |
alias | ARABIDOPSIS THIOREDOXIN M-TYPE 1 |
alias | ATM1 |
uniprot | O48737 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0006979 | IGI | UniProt | response to oxidative stress | 1 2 3 4 5 6 7 8 9 |
GO:0043085 | IDA, RCA | Gene Ontology | positive regulation of catalytic activity | 1 2 |
GO:0009409 | IEP, RCA, | UniProt | response to cold | 1 2 3 4 5 6 7 8 9 10 |
GO:0006109 | IDA | UniProt | regulation of carbohydrate metabolic process | 1 2 3 4 5 6 7 8 9 |
GO:0043086 | IDA | Gene Ontology | negative regulation of catalytic activity | 1 |
GO:0000023 | RCA | Gene Ontology | maltose metabolic process | 1 |
GO:0006098 | RCA | Gene Ontology | pentose-phosphate shunt | 1 |
GO:0006364 | RCA | Gene Ontology | rRNA processing | 1 |
GO:0009657 | RCA | Gene Ontology | plastid organization | 1 |
GO:0009965 | RCA | Gene Ontology | leaf morphogenesis | 1 |
GO:0010027 | RCA | Gene Ontology | thylakoid membrane organization | 1 |
GO:0010207 | RCA | Gene Ontology | photosystem II assembly | 1 |
GO:0019252 | RCA | Gene Ontology | starch biosynthetic process | 1 |
GO:0030154 | RCA | Gene Ontology | cell differentiation | 1 |
GO:0042742 | RCA | Gene Ontology | defense response to bacterium | 1 |
GO:0045893 | RCA | Gene Ontology | positive regulation of transcription, DNA-dependent | 1 |
GO:0045454 | IEA | UniProt | cell redox homeostasis | 1 2 3 4 5 6 7 8 |
GO:0006662 | IEA | UniProt | glycerol ether metabolic process | 1 2 3 4 5 6 7 8 |
GO:0019725 | IEA | PLAZA Homology | cellular homeostasis | HOM03M000465 |
GO:0018904 | IEA | PLAZA Homology | ether metabolic process | HOM03M000465 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0008047 | IDA | UniProt | enzyme activator activity | 1 2 3 4 5 6 7 8 9 |
GO:0004857 | IDA | UniProt | enzyme inhibitor activity | 1 2 3 4 5 6 7 8 9 |
GO:0015035 | IEA | UniProt | protein disulfide oxidoreductase activity | 1 2 3 4 5 6 7 8 |
GO:0015036 | IEA | PLAZA Homology | disulfide oxidoreductase activity | HOM03M000465 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0009507 | IDA, ISM | Gene Ontology | chloroplast | 1 2 |
GO:0009579 | IDA | UniProt | thylakoid | 1 2 3 4 5 6 7 8 9 |
GO:0009570 | IDA | UniProt | chloroplast stroma | 1 2 3 4 5 6 7 8 9 |
GO:0010319 | IDA | UniProt | stromule | 1 2 3 4 5 6 7 8 9 |
GO:0048046 | IDA | UniProt | apoplast | 1 2 3 4 5 6 7 8 9 |
GO:0009534 | IDA | Gene Ontology | chloroplast thylakoid | 1 |
GO:0009941 | IDA | UniProt | chloroplast envelope | 1 2 3 4 5 6 7 8 9 |
GO:0009535 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid membrane | AT4G03520 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
Mapman id | Description |
---|---|
21.1 | redox.thioredoxin |
No SignalP domains detected for this gene.